LOCUS       NM_001013180             331 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus secretoglobin, family 3A, member 1 (Scgb3a1),
            mRNA.
ACCESSION   NM_001013180 XM_340791
VERSION     NM_001013180.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Ge Y, Waldemer RJ, Nalluri R, Nuzzi PD and Chen J.
  TITLE     RNAi screen reveals potentially novel roles of cytokines in
            myoblast differentiation
  JOURNAL   PLoS One 8 (7), e68068 (2013)
   PUBMED   23844157
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 331)
  AUTHORS   Gonzalez-Begne M, Lu B, Han X, Hagen FK, Hand AR, Melvin JE and
            Yates JR.
  TITLE     Proteomic analysis of human parotid gland exosomes by
            multidimensional protein identification technology (MudPIT)
  JOURNAL   J Proteome Res 8 (3), 1304-1314 (2009)
   PUBMED   19199708
REFERENCE   3  (bases 1 to 331)
  AUTHORS   Palmer DJ, Kelly VC, Smit AM, Kuy S, Knight CG and Cooper GJ.
  TITLE     Human colostrum: identification of minor proteins in the aqueous
            phase by proteomics
  JOURNAL   Proteomics 6 (7), 2208-2216 (2006)
   PUBMED   16502470
REFERENCE   4  (bases 1 to 331)
  AUTHORS   Reynolds SD, Reynolds PR, Pryhuber GS, Finder JD and Stripp BR.
  TITLE     Secretoglobins SCGB3A1 and SCGB3A2 define secretory cell subsets in
            mouse and human airways
  JOURNAL   Am J Respir Crit Care Med 166 (11), 1498-1509 (2002)
   PUBMED   12406855
REFERENCE   5  (bases 1 to 331)
  AUTHORS   Krop IE, Sgroi D, Porter DA, Lunetta KL, LeVangie R, Seth P, Kaelin
            CM, Rhei E, Bosenberg M, Schnitt S, Marks JR, Pagon Z, Belina D,
            Razumovic J and Polyak K.
  TITLE     HIN-1, a putative cytokine highly expressed in normal but not
            cancerous mammary epithelial cells
  JOURNAL   Proc Natl Acad Sci U S A 98 (17), 9796-9801 (2001)
   PUBMED   11481438
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF436841.1.
            
            On Apr 20, 2005 this sequence version replaced XM_340791.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF436841.1, CF108592.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680412, SAMN06680414
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="W"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q21"
     gene            1..331
                     /gene="Scgb3a1"
                     /gene_synonym="Hin1; PnSP-2; Pnsp2; secretoglobin"
                     /note="secretoglobin, family 3A, member 1"
                     /db_xref="GeneID:338418"
                     /db_xref="RGD:727901"
     exon            1..67
                     /gene="Scgb3a1"
                     /gene_synonym="Hin1; PnSP-2; Pnsp2; secretoglobin"
                     /inference="alignment:Splign:2.1.0"
     CDS             13..327
                     /gene="Scgb3a1"
                     /gene_synonym="Hin1; PnSP-2; Pnsp2; secretoglobin"
                     /note="pneumo secretory protein 2"
                     /codon_start=1
                     /product="secretoglobin family 3A member 1 precursor"
                     /protein_id="NP_001013198.1"
                     /db_xref="GeneID:338418"
                     /db_xref="RGD:727901"
                     /translation="MKLTAIFLVFCVALLSDSGVAFFVDSLAKPVVEPVAALAPAAEA
                     VAGAVPSLPLSHLAILRFILASLGIPLDPLIDGSRKCVTELGPEAVGAVKSLLGALTT
                     FG"
     exon            68..303
                     /gene="Scgb3a1"
                     /gene_synonym="Hin1; PnSP-2; Pnsp2; secretoglobin"
                     /inference="alignment:Splign:2.1.0"
     exon            304..331
                     /gene="Scgb3a1"
                     /gene_synonym="Hin1; PnSP-2; Pnsp2; secretoglobin"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tctcattcca ccatgaagct caccgccatc tttctagtgt tctgtgtggc tctgctcagc
       61 gactctggcg ttgctttctt cgtggattca ctggccaagc ctgtggtaga acccgtggct
      121 gcccttgctc cagctgcaga ggctgtggca ggggctgtgc ctagcctacc attaagccac
      181 ttggccatcc tgaggttcat cctggccagc ctgggcatcc cattggatcc tctcatagat
      241 ggttccagga agtgcgtcac cgagctgggc cctgaggctg taggagctgt gaagtcactg
      301 ctgggggccc tgacaacgtt cggttgaggt g
//
