LOCUS       NM_177482                669 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus secretoglobin, family 1D, member 2 (Scgb1d2),
            mRNA.
ACCESSION   NM_177482
VERSION     NM_177482.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Palmer,D.J., Kelly,V.C., Smit,A.M., Kuy,S., Knight,C.G. and
            Cooper,G.J.
  TITLE     Human colostrum: identification of minor proteins in the aqueous
            phase by proteomics
  JOURNAL   Proteomics 6 (7), 2208-2216 (2006)
   PUBMED   16502470
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Reynolds,S.D., Reynolds,P.R., Pryhuber,G.S., Finder,J.D. and
            Stripp,B.R.
  TITLE     Secretoglobins SCGB3A1 and SCGB3A2 define secretory cell subsets in
            mouse and human airways
  JOURNAL   Am J Respir Crit Care Med 166 (11), 1498-1509 (2002)
   PUBMED   12406855
REFERENCE   3  (bases 1 to 669)
  AUTHORS   Claessens,F., Celis,L., De Vos,P., Peeters,B., Heyns,W.,
            Verhoeven,G. and Rombauts,W.
  TITLE     Intronic androgen response elements of prostatic binding protein
            genes
  JOURNAL   Biochem Biophys Res Commun 191 (2), 688-694 (1993)
   PUBMED   8461022
REFERENCE   4  (bases 1 to 669)
  AUTHORS   De Vos,P., Claessens,F., Winderickx,J., Van Dijck,P., Celis,L.,
            Peeters,B., Rombauts,W., Heyns,W. and Verhoeven,G.
  TITLE     Interaction of androgen response elements with the DNA-binding
            domain of the rat androgen receptor expressed in Escherichia coli
  JOURNAL   J Biol Chem 266 (6), 3439-3443 (1991)
   PUBMED   1995608
REFERENCE   5  (bases 1 to 669)
  AUTHORS   Delaey,B., Dirckx,L., Peeters,B., Volckaert,G., Mous,J., Heyns,W.
            and Rombauts,W.
  TITLE     The nucleotide sequence of cDNA complementary to the C1 component
            of rat prostatic binding protein
  JOURNAL   Eur J Biochem 133 (3), 645-649 (1983)
   PUBMED   6688048
REFERENCE   6  (bases 1 to 669)
  AUTHORS   Parker,M., Needham,M., White,R., Hurst,H. and Page,M.
  TITLE     Prostatic steroid binding protein: organisation of C1 and C2 genes
  JOURNAL   Nucleic Acids Res 10 (17), 5121-5132 (1982)
   PUBMED   6292830
REFERENCE   7  (bases 1 to 669)
  AUTHORS   Parker,M., Needham,M. and White,R.
  TITLE     Prostatic steroid binding protein: gene duplication and steroid
            binding
  JOURNAL   Nature 298 (5869), 92-94 (1982)
   PUBMED   6896362
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Apr 4, 2023 this sequence version replaced NM_177482.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BI285409.1, BI284927.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on manual assertion, longest
                                      protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-104               JAXUCZ010000001.1  215656607-215656710 c
            105-295             JAXUCZ010000001.1  215654697-215654887 c
            296-669             JAXUCZ010000001.1  215653464-215653837 c
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..669
                     /gene="Scgb1d2"
                     /gene_synonym="Pbpc1bs; Psbpc1"
                     /note="secretoglobin, family 1D, member 2"
                     /db_xref="GeneID:309203"
                     /db_xref="RGD:708459"
     exon            1..104
                     /gene="Scgb1d2"
                     /gene_synonym="Pbpc1bs; Psbpc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..379
                     /gene="Scgb1d2"
                     /gene_synonym="Pbpc1bs; Psbpc1"
                     /note="prostatic steroid-binding protein C1; prostatein
                     peptide C1; androgen receptor"
                     /codon_start=1
                     /product="prostatic steroid-binding protein C1 precursor"
                     /protein_id="NP_803435.1"
                     /db_xref="GeneID:309203"
                     /db_xref="RGD:708459"
                     /translation="MSTIKLSLCLLIMLAVCCYEANASQICELVAHETISFLMKSEEE
                     LKKELEMYNAPPAAVEAKLEVKRCVDQMSNGDRLVVAETLVYIFLECGVKQWVETYYP
                     EIDFYYDMN"
     exon            105..295
                     /gene="Scgb1d2"
                     /gene_synonym="Pbpc1bs; Psbpc1"
                     /inference="alignment:Splign:2.1.0"
     exon            296..669
                     /gene="Scgb1d2"
                     /gene_synonym="Pbpc1bs; Psbpc1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggagagttc atttgctcac catttgctaa gtagaaaact gaaatgagca ccattaagct
       61 gagcctgtgt cttctgatca tgctggctgt ttgttgctat gaagctaatg ctagccagat
      121 ctgtgaactt gttgctcatg aaaccataag cttcttaatg aaaagtgagg aagaactgaa
      181 gaaggaactt gagatgtata atgcacctcc agcagctgtt gaagcaaaac tggaagtgaa
      241 gagatgtgta gaccagatga gcaatggaga cagattggta gtagcagaaa cactggtata
      301 catttttttg gaatgtggtg tgaaacaatg ggtagaaaca tattatcctg agatcgattt
      361 ctactacgat atgaactgat ttttcctgtt caatgtgatg gtttcaaagt cttgcaccaa
      421 taaattattc tccttgcatt ttgctgtttg tctgttgtta tcctaagtct caggtcttac
      481 aatgaacaga ctttgataaa caaaacaaac aaataaatga atgaataaat aaataaatga
      541 cattttcagt aatggtaata tgtaagagta atctgtaatg tgtttgttca aacatcatcc
      601 tgcatttccc tgcaagtaag ttccacattt ctgtggccac aaataaaagt gattaaagat
      661 gatgacaaa
//
