LOCUS       NM_013051                463 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus secretoglobin family 1A member 1 (Scgb1a1), mRNA.
ACCESSION   NM_013051
VERSION     NM_013051.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   Fornander,L., Ghafouri,B., Kihlstrom,E., Akerlind,B., Schon,T.,
            Tagesson,C. and Lindahl,M.
  TITLE     Innate immunity proteins and a new truncated form of SPLUNC1 in
            nasopharyngeal aspirates from infants with respiratory syncytial
            virus infection
  JOURNAL   Proteomics Clin Appl 5 (9-10), 513-522 (2011)
   PUBMED   21805676
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Shiyu,S., Zhiyu,L., Mao,Y., Lin,B., Lijia,W., Tianbao,Z., Jie,C.
            and Tingyu,L.
  TITLE     Polydatin up-regulates Clara cell secretory protein to suppress
            phospholipase A2 of lung induced by LPS in vivo and in vitro
  JOURNAL   BMC Cell Biol 12, 31 (2011)
   PUBMED   21787397
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 463)
  AUTHORS   De Luca,D., Minucci,A., Tripodi,D., Piastra,M., Pietrini,D.,
            Zuppi,C., Conti,G., Carnielli,V.P. and Capoluongo,E.
  TITLE     Role of distinct phospholipases A2 and their modulators in meconium
            aspiration syndrome in human neonates
  JOURNAL   Intensive Care Med 37 (7), 1158-1165 (2011)
   PUBMED   21567110
REFERENCE   4  (bases 1 to 463)
  AUTHORS   Ku,M.S., Sun,H.L., Lu,K.H., Sheu,J.N., Lee,H.S., Yang,S.F. and
            Lue,K.H.
  TITLE     The CC16 A38G polymorphism is associated with the development of
            asthma in children with allergic rhinitis
  JOURNAL   Clin Exp Allergy 41 (6), 794-800 (2011)
   PUBMED   21255142
REFERENCE   5  (bases 1 to 463)
  AUTHORS   Hasegawa,M., Fujimoto,M., Hamaguchi,Y., Matsushita,T., Inoue,K.,
            Sato,S. and Takehara,K.
  TITLE     Use of serum clara cell 16-kDa (CC16) levels as a potential
            indicator of active pulmonary fibrosis in systemic sclerosis
  JOURNAL   J Rheumatol 38 (5), 877-884 (2011)
   PUBMED   21239758
REFERENCE   6  (bases 1 to 463)
  AUTHORS   Hard,T., Barnes,H.J., Larsson,C., Gustafsson,J.A. and Lund,J.
  TITLE     Solution structure of a mammalian PCB-binding protein in complex
            with a PCB
  JOURNAL   Nat Struct Biol 2 (11), 983-989 (1995)
   PUBMED   7583672
REFERENCE   7  (bases 1 to 463)
  AUTHORS   Dodge,D.E., Plopper,C.G. and Rucker,R.B.
  TITLE     Regulation of Clara cell 10 kD protein secretion by pilocarpine:
            quantitative comparison of nonciliated cells in rat bronchi and
            bronchioles based on laser scanning confocal microscopy
  JOURNAL   Am J Respir Cell Mol Biol 10 (3), 259-270 (1994)
   PUBMED   8117444
REFERENCE   8  (bases 1 to 463)
  AUTHORS   Umland,T.C., Swaminathan,S., Furey,W., Singh,G., Pletcher,J. and
            Sax,M.
  TITLE     Refined structure of rat Clara cell 17 kDa protein at 3.0 A
            resolution
  JOURNAL   J Mol Biol 224 (2), 441-448 (1992)
   PUBMED   1560460
REFERENCE   9  (bases 1 to 463)
  AUTHORS   Nordlund-Moller,L., Andersson,O., Ahlgren,R., Schilling,J.,
            Gillner,M., Gustafsson,J.A. and Lund,J.
  TITLE     Cloning, structure, and expression of a rat binding protein for
            polychlorinated biphenyls. Homology to the hormonally regulated
            progesterone-binding protein uteroglobin
  JOURNAL   J Biol Chem 265 (21), 12690-12693 (1990)
   PUBMED   2115524
REFERENCE   10 (bases 1 to 463)
  AUTHORS   Hagen,G., Wolf,M., Katyal,S.L., Singh,G., Beato,M. and Suske,G.
  TITLE     Tissue-specific expression, hormonal regulation and 5'-flanking
            gene region of the rat Clara cell 10 kDa protein: comparison to
            rabbit uteroglobin
  JOURNAL   Nucleic Acids Res 18 (10), 2939-2946 (1990)
   PUBMED   2349092
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from J05536.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: J05536.1, FQ151024.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676784, SAMN16676785
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..463
                     /gene="Scgb1a1"
                     /gene_synonym="CC10; CC16; CCSP; PCBB; Ugb"
                     /note="secretoglobin family 1A member 1"
                     /db_xref="GeneID:25575"
                     /db_xref="RGD:3934"
     exon            1..112
                     /gene="Scgb1a1"
                     /gene_synonym="CC10; CC16; CCSP; PCBB; Ugb"
                     /inference="alignment:Splign:2.1.0"
     CDS             58..348
                     /gene="Scgb1a1"
                     /gene_synonym="CC10; CC16; CCSP; PCBB; Ugb"
                     /note="CCPBP; PCB-binding protein; club cell protein 16;
                     secretoglobin, family 1A, member 1 (uteroglobin);
                     Uteroglobin (club cell secretory protein); club cell 10
                     kDa secretory protein; club cell phospholipid-binding
                     protein; club secretory protein-16; club cells 10 kDa
                     secretory protein"
                     /codon_start=1
                     /product="uteroglobin precursor"
                     /protein_id="NP_037183.1"
                     /db_xref="GeneID:25575"
                     /db_xref="RGD:3934"
                     /translation="MKIAITITVLMLSICCSSASSDICPGFLQVLEALLLGSESNYEA
                     ALKPFNPASDLQNAGTQLKRLVDTLPQETRINIVKLTEKILTSPLCEQDLRV"
     exon            113..300
                     /gene="Scgb1a1"
                     /gene_synonym="CC10; CC16; CCSP; PCBB; Ugb"
                     /inference="alignment:Splign:2.1.0"
     exon            301..463
                     /gene="Scgb1a1"
                     /gene_synonym="CC10; CC16; CCSP; PCBB; Ugb"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctcacatta caacatcagc ccacatctac agacagccca agcctccggc ctctaccatg
       61 aagatcgcca tcacaatcac tgtgctcatg ctgtccatct gctgcagctc agcctcttcg
      121 gacatctgcc caggatttct tcaagtcctt gaggccctcc tcctaggctc agagtctaat
      181 tatgaggcag ccctgaagcc tttcaaccct gcctcagacc tgcaaaatgc aggaacccag
      241 ctgaagaggc tggtggatac cctcccacag gagaccagaa taaacatcgt gaagctcacg
      301 gagaagatcc taacaagtcc tctgtgtgag caagatttaa gagtctgaag ctcactggat
      361 ttcagagata ttctacgcta aagccccctg tcattcccct ctccctcctt gacctcccta
      421 caccaacccc gccttcctct ttgcaataaa cttcgagcat ctc
//
