LOCUS       NM_001135855            3753 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus scavenger receptor class A, member 5 (Scara5),
            mRNA.
ACCESSION   NM_001135855 XM_001066668 XM_224299
VERSION     NM_001135855.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3753)
  AUTHORS   Antoni,G., Oudot-Mellakh,T., Dimitromanolakis,A., Germain,M.,
            Cohen,W., Wells,P., Lathrop,M., Gagnon,F., Morange,P.E. and
            Tregouet,D.A.
  TITLE     Combined analysis of three genome-wide association studies on vWF
            and FVIII plasma levels
  JOURNAL   BMC Med Genet 12, 102 (2011)
   PUBMED   21810271
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3753)
  AUTHORS   Li,J.Y., Paragas,N., Ned,R.M., Qiu,A., Viltard,M., Leete,T.,
            Drexler,I.R., Chen,X., Sanna-Cherchi,S., Mohammed,F., Williams,D.,
            Lin,C.S., Schmidt-Ott,K.M., Andrews,N.C. and Barasch,J.
  TITLE     Scara5 is a ferritin receptor mediating non-transferrin iron
            delivery
  JOURNAL   Dev Cell 16 (1), 35-46 (2009)
   PUBMED   19154717
REFERENCE   3  (bases 1 to 3753)
  AUTHORS   Fujimoto,M., Oshima,K., Shinkawa,T., Wang,B.B., Inouye,S.,
            Hayashida,N., Takii,R. and Nakai,A.
  TITLE     Analysis of HSF4 binding regions reveals its necessity for gene
            regulation during development and heat shock response in mouse
            lenses
  JOURNAL   J Biol Chem 283 (44), 29961-29970 (2008)
   PUBMED   18755693
REFERENCE   4  (bases 1 to 3753)
  AUTHORS   Jiang,Y., Oliver,P., Davies,K.E. and Platt,N.
  TITLE     Identification and characterization of murine SCARA5, a novel class
            A scavenger receptor that is expressed by populations of epithelial
            cells
  JOURNAL   J Biol Chem 281 (17), 11834-11845 (2006)
   PUBMED   16407294
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from CH474023.1.
            
            [WARNING] On Jul 16, 2024 this sequence was replaced by
            NM_001135855.2.
            
            On or before Oct 17, 2008 this sequence version replaced
            XM_224299.4, XM_001066668.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760386 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..3753
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p12"
     gene            1..3753
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /note="scavenger receptor class A, member 5"
                     /db_xref="GeneID:305974"
                     /db_xref="RGD:1306539"
     exon            1..330
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /inference="alignment:Splign:2.1.0"
     exon            331..448
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /inference="alignment:Splign:2.1.0"
     CDS             334..1812
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /note="scavenger receptor class A, member 5 (putative)"
                     /codon_start=1
                     /product="scavenger receptor class A member 5"
                     /protein_id="NP_001129327.1"
                     /db_xref="GeneID:305974"
                     /db_xref="RGD:1306539"
                     /translation="MMDNKAMYLHTVSDRDNGSIFEEPFDGRSLSKLNLCEDGPCHKR
                     RAGGCCTQLGSLSALKHAVLGLYLLVFLTLVGVFILAVSRPRSSPDDLKALTRNINRL
                     NESFRDMQLRLLQAPLQADLTEQVWKVQDALQNQTDSLLALAGLVQRLEGTLWGLHAQ
                     AAQTEQAVALLRDRTGQQSDSAQLELYQLQVESNRSQLLLQRHAGLLDGLAHRVGVLG
                     EELADVGGALRGLNHSLSYDVALHSTWLQDLQVLVSNASADTRRMRLVHMDMEMQLKQ
                     ELATLNVVTEDLRLKDWEHSIALRNITLAKGPPGPKGDQGNEGKEGKPGSPGLPGSRG
                     LPGERGDPGMPGPKGDDGKLGATGPMGMRGFKGERGPKGEKGERGERAGDMDFTMIRL
                     VNGSGPHQGRVEVFHDRRWGTVCDDGWDKKDGDVVCRMLGFHSVEEVHRTARFGQGTG
                     RIWMDDVNCKGTESSIFHCQFSKWGVTNCGHAEDAGVTCTAL"
     exon            449..577
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /inference="alignment:Splign:2.1.0"
     exon            578..1252
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /inference="alignment:Splign:2.1.0"
     exon            1253..1333
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /inference="alignment:Splign:2.1.0"
     exon            1334..1432
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /inference="alignment:Splign:2.1.0"
     exon            1433..1480
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /inference="alignment:Splign:2.1.0"
     exon            1481..1675
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /inference="alignment:Splign:2.1.0"
     exon            1676..3753
                     /gene="Scara5"
                     /gene_synonym="RGD1306539"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgcggatgac tccacagact gtctccggat cgctttctga cgctggccga cgctgcacca
       61 aggcagggag tcccacgtgc agacccgtca ttcagccacc ttgttgaact gatcctccca
      121 tagaagtgac tgtggtcctg acctaagtcc ctaggtgacc ctgaagcctc tttctatatg
      181 actccatctg gatttgactg gctgtgggga caagcttcaa gggactttct gggtgaaggg
      241 actttgtgag gcagcagtcg gctctctggc taccatggca atcgctggga actgaaagga
      301 cagggtccag cttcagcacg gggcatacag gctatgatgg acaacaaagc catgtacctg
      361 catactgtga gtgaccgtga caacggctcc atctttgagg aaccctttga tggcaggagc
      421 ctgtccaaac tgaacctgtg tgaggatggt ccatgtcaca agcggcgggc gggtggctgc
      481 tgcacacagc tgggctccct gtcagcgctg aagcatgcgg tcctggggct gtatcttctg
      541 gtcttcctga ctcttgtggg tgtcttcatc ttagcagtgt cccggcctcg cagctcccca
      601 gatgacttga aggcgctgac taggaacatc aaccggctga atgaaagctt ccgggacatg
      661 cagctacggc tgctgcaggc tccgttgcag gcagacctga cggaacaggt gtggaaggtt
      721 caggatgcac tgcagaacca gacagactca ctgttggccc tggcaggctt ggtgcagaga
      781 ctggagggca cactgtgggg gctgcacgcg caggctgcac agactgagca ggcggtggcc
      841 ctgctgcgtg accgaacagg acagcagagc gactccgcac agctggaact ctaccagttg
      901 caggtggaaa gcaatcgaag ccagctgctg ctgcagcggc acgcaggcct gctggatggg
      961 ctagcacaca gggtgggggt cctgggcgag gagctggctg atgtgggtgg tgcacttcgt
     1021 ggcctcaacc acagcctatc ctatgacgtg gctctgcaca gcacgtggct acaggacctg
     1081 caggtgctgg tgagcaatgc cagcgcagac acacgccgta tgaggctggt gcacatggac
     1141 atggagatgc aactcaagca ggagctggcc acactcaatg tggtgactga ggacctgcgt
     1201 ctgaaggact gggagcactc catcgccctg aggaacatca cccttgccaa aggaccacca
     1261 ggacccaaag gtgaccaagg gaatgaaggg aaggagggaa agccaggtag ccctggactt
     1321 cctggatctc gaggtctgcc aggagagaga ggtgacccag gaatgcctgg tcctaagggt
     1381 gatgatggga agctaggagc cacaggtccc atgggcatgc gcggattcaa aggtgagaga
     1441 ggcccaaagg gagagaaagg agaaagagga gagagagctg gtgatatgga tttcacaatg
     1501 attcgcctgg tgaatggctc tggcccacac cagggccggg tggaggtatt ccacgatcgt
     1561 cgctggggca cagtgtgtga tgacggctgg gacaagaagg atggggacgt ggtgtgccgc
     1621 atgctgggct tccacagtgt ggaggaggtg caccggacag ctcgttttgg gcaaggcaca
     1681 gggaggatct ggatggatga tgtgaactgc aagggaactg agagctccat cttccactgc
     1741 cagttctcca aatggggcgt gacaaattgt gggcatgctg aggacgctgg agtgacttgt
     1801 actgccctct gaaagtggcc acagcccaag gctagggcac tgcctcagag ccacattcct
     1861 gtgtctctgg ggtaggggga attgcttgga gccacctagc catggctcgt gcccaatcca
     1921 acaccaccct acccttgctg ccaattggcc atactctggt tccaaggtga cctggtgtca
     1981 ctctctttgc agacaactgc tccaacgtgc tcgtgggacc tacattctgt ctttctcttc
     2041 caccaaggtt tctacatggg gagccccagt caattgaacc agcagtgtgt tcagttatct
     2101 gaagacgatt cataaaggcc tggggatcca tattctcttt ggtctcttgg ttatggatgg
     2161 atgatgatat gatgttatag gcaagagcag caatggaggt gggaggtgtt atgggtcatt
     2221 tactttgcag ataactcccc agcaagtaga aacccttaat gactctgttt ccccactttt
     2281 actctgcctc ttcacactat atattagttt gaggaagggg cagtggagaa gccagctacg
     2341 gaggacactt aagaaaatgg cagacacctg aagaacccag ctggagctgg aaagggaagg
     2401 ggaaaactac catggtgtgt tacatcatat cttgggtgct ggaatcactt atccatattg
     2461 ctgtgttcat aatacaaggc atgtccctcg gggcaggatc ctgcctcttg ggagtgctca
     2521 cctgacctgc tcacctggct tccaagttag aagaccaaga atgaccaaga ctgaaaccag
     2581 gctcccatat gaatcttagt ctgctcctgt taggcctgag caacaagctt gggctatcga
     2641 cattgcttat cagaaggttg tatgcaccaa gtcctccagc gagcacatgt gagatcagac
     2701 gtgatgggct tctaagtcaa gtgtacacac aggagggtga ttttaaagtg tgacatggga
     2761 ggtagacaca gtaacctgag cccatcagtc attagagact gtgtcttggg gtcgttgatg
     2821 acagtgtacc ttccaggcct ctctaaatag aatcttgtga tccaaagaat gcaatcctga
     2881 taagccccaa aaggatagaa agtatgaaat tctataacct tcccatggga aatgaaagcc
     2941 cttacgactc ttcaagcctg tgagcttcac ttccctcctg tgtacaaaga gagcatcatc
     3001 tgttcttgac ccaaggagga ggtgaactag attgtgcatg tgttctagaa ctgggggagg
     3061 tatacagggc agcaactgag tgtagacctg tctgtagata gtagagtccc agacacaatc
     3121 acatatcctg tgaggtgagc actgtcctgc tctgggtcat gaagacctag gtacccccag
     3181 gtgtagttgc cccaacgatc ctgactggct gctcagccaa tatgtgatct tggtcattct
     3241 tgcttgcaat atgtgttact cactactgtt ctcatgatat gaccaactgt tatgtttaca
     3301 taacatgcat gtactcatgc atcttcttgc agagcaaatg tatgtatacc tgtataagag
     3361 gagcactcct attacattgt tcagcacgtc acgatggtta tgtttttaaa agatatgcta
     3421 gaggctatgt ttttttaagg tattttttta aaagtgccta aacatcactt tgagaattgt
     3481 gggaaagaat ccatttaccc caatgatgaa gactcagtca ctttctcact tggtctttac
     3541 atggaagaaa cacacgtttg gttttatgtc tataaaagca atgttgaaaa gtattttacc
     3601 cataaaaata aaagtcgact agtttacaaa cctacctatg agggcgtgga aacgaccatg
     3661 gcctgtattt cagggactaa tggaaactag gcctaaaata cttcagatgt tttgtaagaa
     3721 agactctcaa taaagcagac atttgaaata gat
//
