LOCUS       NM_001108870            3358 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus scavenger receptor class A, member 3 (Scara3),
            mRNA.
ACCESSION   NM_001108870 XM_001066917 XM_344421
VERSION     NM_001108870.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3358)
  AUTHORS   Fork C, Hitzel J, Nichols BJ, Tikkanen R and Brandes RP.
  TITLE     Flotillin-1 facilitates toll-like receptor 3 signaling in human
            endothelial cells
  JOURNAL   Basic Res Cardiol 109 (6), 439 (2014)
   PUBMED   25204797
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474023.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_344421.3, XM_001066917.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5756307, SAMEA5760384
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3358
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p12"
     gene            1..3358
                     /gene="Scara3"
                     /note="scavenger receptor class A, member 3"
                     /db_xref="GeneID:364405"
                     /db_xref="RGD:1309269"
     exon            1..250
                     /gene="Scara3"
                     /inference="alignment:Splign:2.1.0"
     CDS             244..2064
                     /gene="Scara3"
                     /codon_start=1
                     /product="scavenger receptor class A member 3"
                     /protein_id="NP_001102340.1"
                     /db_xref="GeneID:364405"
                     /db_xref="RGD:1309269"
                     /translation="MKVRSAGSDRDVLCVTEEDLAGEDEDMSSFPCSQEGRAGPRCNR
                     CQKNLSLHTSVRILYLFLALLLVAVAVLASLVFRKVDSLSEDISLAQSIYNKKLVSMQ
                     ENLQGLDPKALINCSFCREAEQLGQEIRKLQEELEGLQKMLLAQEVQLDQTSQAHELL
                     STTSSQISQEMGTCSFSIHQVNQSLGLFLAQVRGWQATTAGMDISLKDLTQECYDVKA
                     AVHQINFTVGQTAEWIHGIQRKTDEETLTLQKIVTDWQNYTRLFGGLRSTSAKTGEIV
                     KTIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHDLQYHTRY
                     AQNRTVERFESLEGRMASHEIEIGTIFTNINATDNHVHSMLKYLDDVRLSCTLGFHTH
                     AEELYYLNKSVSLMLGTTDLLRERFSLLSARLDFNVRNLSMIMEEMKAVDTHHGEILR
                     NVTIIRGVPGPPGPRGFKGDTGMKGPVGNKGPKGDPGSLGPPGPQGPQGQPGEPGPVG
                     ERGPAGPRGFPGLKGSKGSFGTGGPRGQPGPKGDVGPPGPEGPPGSQGPSGPQGKPGI
                     SGKAGSPGQRGATGPKGEPGIQGPPGLPGPPGPPGNQSPY"
     exon            251..349
                     /gene="Scara3"
                     /inference="alignment:Splign:2.1.0"
     exon            350..469
                     /gene="Scara3"
                     /inference="alignment:Splign:2.1.0"
     exon            470..568
                     /gene="Scara3"
                     /inference="alignment:Splign:2.1.0"
     exon            569..1612
                     /gene="Scara3"
                     /inference="alignment:Splign:2.1.0"
     exon            1613..3358
                     /gene="Scara3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcaacacagc tcgccgggct ccggcgggca gcgtggcgtc cccagcctgc gaccccccgg
       61 accttcctcc tgctacgctg tctaagcagg ggcacagagc cgcatgtgtc cccacgcaaa
      121 tcccagacac gcgggccgca cctaggggcg gcggtcggtg cctggggagg accccggctt
      181 cccgctccat ccaaggctac tcgagcaccg cggggccctg cagaggcccg cgcaggaggg
      241 accatgaaag tgagatcagc tggcagtgac agggatgtac tgtgtgtcac tgaagaggac
      301 ctggctggtg aagacgagga tatgtcatcc ttcccatgct cccaagaggg ccgggcagga
      361 ccccgttgca accgctgcca gaagaaccta tctttgcaca catcagtgcg gattttgtac
      421 ctcttcctgg ctctgctcct ggtggccgtg gctgtgctgg cctctctagt ttttagaaag
      481 gtggactctc tctcagaaga catctccttg gcccagtcca tctataataa gaagcttgtg
      541 tcaatgcaag aaaatcttca aggactggac ccaaaagccc tgatcaattg ttccttttgc
      601 cgtgaggctg agcagctggg gcaagagatc aggaagctcc aggaggagct ggaggggctt
      661 cagaagatgc tgctggccca ggaggtccag ctggaccaga cttcccaggc ccatgagctg
      721 ctctccacca caagcagtca aatctcccag gagatgggca cttgttcctt ctccattcac
      781 caggtcaatc aatccctggg actcttcctg gcacaagtga ggggttggca ggccaccaca
      841 gcaggtatgg acatcagcct gaaggacctc acccaggagt gctatgacgt caaggctgct
      901 gtacaccaga tcaacttcac ggtgggccag actgctgagt ggatccacgg gatccagagg
      961 aagacagacg aggagaccct gaccctgcag aagatagtca ctgactggca gaactacacc
     1021 aggctctttg gaggtttgcg aagcacctct gccaagactg gagaaatagt caagactatt
     1081 caagccaccc tgggggcctc ctctcagcgc attagccaga attctgagag catgcatgac
     1141 ctggtgctac aggtcatggg cctacagcta caactggaca atatctcttc ctttttggat
     1201 gaccatgagg aaaacatgca tgacctccaa taccacaccc gatatgccca gaatcgcaca
     1261 gtggaaaggt tcgagtctct ggaaggacgc atggcttctc acgagattga aattggcacc
     1321 atcttcacca atatcaatgc cactgacaac cacgtgcaca gcatgctcaa gtacctggac
     1381 gatgtacggc tgtcttgcac actaggcttc cacacccatg ccgaggagct ctactacctg
     1441 aataagtctg tctccctcat gctgggcacc acagatctgc tcagggagcg cttcagtctc
     1501 ctcagtgctc ggttagactt caatgtccga aacctctcca tgatcatgga ggaaatgaag
     1561 gctgtggaca cacatcacgg agaaatcctt cgcaatgtca ccatcatccg aggtgtcccc
     1621 ggccctcccg gaccaagagg attcaaagga gatacaggca tgaaaggacc tgttggtaac
     1681 aaaggaccta aaggggatcc tggcagtctg ggaccccccg gacctcaggg tcctcaggga
     1741 caacctgggg aaccaggacc tgtgggagaa agagggccag ctggcccccg aggctttcca
     1801 ggcctcaaag gctcaaaggg cagctttggc actggagggc caagggggca gccaggcccc
     1861 aaaggggatg tgggaccccc agggccagag gggcccccag ggtctcaagg accgtcaggg
     1921 cctcagggaa agccagggat ttcaggaaag gcagggtcac caggccagcg aggggccaca
     1981 gggcctaagg gtgaacccgg catccaaggt ccccctggac tacctggacc tccaggtcca
     2041 ccagggaacc agagccccta ctgaagagtc tttggcctga tgctgccatg caggttagag
     2101 aggggggtca gagaaagcag ccagaatcta caatccttgt tctttaatcc taatatgagg
     2161 gtgtctctta gatctgaggt ctcttagagt cttaggcctc tcagtaatga ctgtaccata
     2221 ggaaaacagc tcatcctcct ccccttttct ctgctggcca aagggagacc tactgggttt
     2281 ctatggctag ttagaaggaa aggctgtgag agcctgctgg tggggaggga taactacctg
     2341 gggtaactag ctctggtctc tgcaataacc cactcaacac aggtcttgaa aaaaaatcca
     2401 gggaaatgtt tggggcattc tagatgacta atgtatatcc agggatagca gcagccccaa
     2461 cttccacccc acacataact aagtcatggt acagtcatgt ggagctgcct tgacccacac
     2521 agggcaggaa aaaaaaatct gcctggctgg cattcccagg cttcatgcgt ggatggtgac
     2581 cctgacaagt tcggagggtt tttagccaca catccagaaa attcctctct tcagtcttac
     2641 ctctgtatct cgagagtggc ctggaaggaa cccaagcaga gttttatcag caggcagaga
     2701 gcctacaggt tccagaacat tctgcttgac tgctcccagg aagaccacag ggccggaggt
     2761 ggaaggacaa gtcaggggta aactcctccc tccaaagcca ccccttgttc atcctagtct
     2821 gccatgcctt gtttccagta atagccaagg aggaagaagc taataacatg gccgctcttg
     2881 cctcttcctc ttggttgacc tgacacagat gcacactgac ctcaccctac tatgacctaa
     2941 gatggctaga gttcttccca cataatagca agctggacaa ggcatgtgaa aagctggaca
     3001 tgcacaagga acttttgatg aacttctttc atgaacttct tgcatacact ggcagaaagg
     3061 gatgctggga atgacttgca tcgtcttgac tcactttcta tagagctgcc ctgctccttc
     3121 cactccagca gactcagaca ctcctgagca ggggctagag ctgtctcctc ccttgccctg
     3181 cctcagagac ctggatgtca tcttcttcct gttcaaagcc tttttgccac cttccttggc
     3241 aacatcagtg tgcaactggc ttgcactacc catccatccc tgctatacaa ttgtcccgtc
     3301 aacatacggt aatatcatgc aacacagtat cactggccca gtaaagagct gtttccat
//
