LOCUS       NM_031725               1725 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus secretory carrier membrane protein 4 (Scamp4),
            mRNA.
ACCESSION   NM_031725
VERSION     NM_031725.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Krebs,C.J. and Pfaff,D.W.
  TITLE     Expression of the SCAMP-4 gene, a new member of the secretory
            carrier membrane protein family, is repressed by progesterone in
            brain regions associated with female sexual behavior
  JOURNAL   Brain Res Mol Brain Res 88 (1-2), 144-154 (2001)
   PUBMED   11295240
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Nov 26, 2020 this sequence version replaced NM_031725.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF285631.1, BC090342.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN12840107,
                                           SAMN12840111 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-32                JAXUCZ010000007.1  9764583-9764614     c
            33-80               JAXUCZ010000007.1  9758671-9758718     c
            81-209              JAXUCZ010000007.1  9758044-9758172     c
            210-366             JAXUCZ010000007.1  9757655-9757811     c
            367-468             JAXUCZ010000007.1  9756429-9756530     c
            469-586             JAXUCZ010000007.1  9755141-9755258     c
            587-1725            JAXUCZ010000007.1  9752193-9753331     c
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..1725
                     /gene="Scamp4"
                     /note="secretory carrier membrane protein 4"
                     /db_xref="GeneID:65170"
                     /db_xref="RGD:68354"
     exon            1..32
                     /gene="Scamp4"
                     /inference="alignment:Splign:2.1.0"
     exon            33..80
                     /gene="Scamp4"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..766
                     /gene="Scamp4"
                     /note="SCAMP-4"
                     /codon_start=1
                     /product="secretory carrier-associated membrane protein 4"
                     /protein_id="NP_113913.2"
                     /db_xref="GeneID:65170"
                     /db_xref="RGD:68354"
                     /translation="MAGKENNFPPLPHFLPLKPCFYQDFSDEIPVEHQVLVKRIYRLW
                     MFYCTTLGVNLVACLAWWIAGGAGANFGLAMLWLVLFTPCSYVCWFRPAYKAFRADSS
                     FNFMAFFFIFGAQFVLTVIQAIGFSGWGACGWLATIGFFGTSVGAAVVMLIPAIMFSL
                     SAVVMAITIVKVHRIYRGAGGSLQKAQTEWSAGTWRNPPSREAQFNSFSGNSLPEYPT
                     VPSYSTSGGQWP"
     exon            81..209
                     /gene="Scamp4"
                     /inference="alignment:Splign:2.1.0"
     exon            210..366
                     /gene="Scamp4"
                     /inference="alignment:Splign:2.1.0"
     exon            367..468
                     /gene="Scamp4"
                     /inference="alignment:Splign:2.1.0"
     exon            469..586
                     /gene="Scamp4"
                     /inference="alignment:Splign:2.1.0"
     exon            587..1725
                     /gene="Scamp4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ataagcgtgg cgttcgcgcg ggtgtccctc aggtggcccc ttctgcctgg gtgccaggtc
       61 agctgacaca gaaatggcag gaaaggagaa caacttcccc ccgctgcctc acttcctgcc
      121 gctgaagccc tgcttctacc aggacttctc tgatgagatc ccggtggagc accaggtgct
      181 ggtgaagagg atctaccggc tgtggatgtt ttactgcacc acgctgggtg taaacctagt
      241 ggcctgcctg gcctggtgga ttgcgggcgg agcgggtgcc aattttggcc tggccatgct
      301 ctggcttgtt ctcttcactc cctgcagcta tgtgtgctgg ttccggcctg cctacaaggc
      361 cttccgagcc gacagctcct ttaacttcat ggcattcttc ttcatctttg gagcccagtt
      421 tgtgctgact gtcattcagg ccatcggctt ctcgggctgg ggcgcgtgtg gttggctggc
      481 caccattggg ttctttggga ccagcgttgg ggctgctgtg gtgatgctga tcccagccat
      541 catgttttcc ttatccgctg tcgtgatggc catcactatt gtgaaggtac acaggatcta
      601 ccgtggggct ggcggaagcc tccagaaggc acaaacagag tggagtgctg gcacctggag
      661 gaacccgccg tccagggagg cccagtttaa cagtttctct gggaacagcc tgcctgagta
      721 ccccactgtc cccagctact caaccagtgg aggccagtgg ccttaggcgg ctggctggcc
      781 ccagcactat gctctgtctc ctgctaccac ccttgatctt gaggcctgag catctcccca
      841 gggtcccagg aggtccttgg cccgtccgtg ttcatctctt gtcagaccct aagcaagcac
      901 tgcccagcag ccactgtcca ctgccatcct gcgagcccgg ctgtgtttgc cctgctccag
      961 cctgcgcaag gagaggcctc agcccccaag cccctggcct ttgttacgga gatatgtgta
     1021 actaagccca gtgcacgtgt gtagatgagt gtgagtggac agtcaggagt gtggcggttg
     1081 tacctgtgtc ctctgccgtc cactataccc atgttcctct gggtcctgct atgtccttgt
     1141 cccacccctt gtgacagtga caacctgctg tcccttccaa cacccaggat cctgagtaga
     1201 gctctgccca cttgcacttc acttggtcaa gggtactctg gcctctctgt gggcaagtgg
     1261 aggagaggga ccagctctgt tgcatggcag gccatacccc cagcagcagg attgccggga
     1321 cacccctgtg ccttagagag acctgtgctt cctccccaca tcctctgcct tcctgggcag
     1381 ctgtggcctt ggtcaagaga accgaactga gtcttggagt gtccacagca cctctgatga
     1441 cactggactc agtgttcttc cttgcgacct gatgctacca gccaagtcac tgagtcccca
     1501 aggcctccct gcagggccat gtcctcatgt gccagtatca tgccaaactg tctgggcacc
     1561 tggtctctat cccatctcag agtggcgggc atggagtcac gtgcccgcca taggtgacac
     1621 ctgtgaccta cagctcttcc ctgccacccc tgggtatgtg cgcccacatg ccatagttgg
     1681 ttttgttatg tgagaatatt ctggaaataa attctctttc tgcag
//
