LOCUS       XM_006238373            1952 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus stabilizer of axonemal microtubules 1
            (Saxo1), mRNA.
ACCESSION   XM_006238373
VERSION     XM_006238373.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006238373.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006238373.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1952
                     /gene="Saxo1"
                     /note="stabilizer of axonemal microtubules 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 4 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:679802"
                     /db_xref="RGD:1583685"
     CDS             342..1772
                     /gene="Saxo1"
                     /codon_start=1
                     /product="stabilizer of axonemal microtubules 1"
                     /protein_id="XP_006238435.1"
                     /db_xref="GeneID:679802"
                     /db_xref="RGD:1583685"
                     /translation="MGKRTCICNLCTCGRHRCPHLPTKIYDKTEKPSLLSEYTENYPI
                     YESYLPRNSFKPECAYQKASIPMEGLTTSRRDFGLHKMLPVKFYQPAAYVPSQESMNL
                     LTSYKHDFNYIPTCPVGLIKPRDSKFPNGDKTVQYLPTYKVDYVPWNQPRRELLRPPH
                     KYRPESAKFENRTTHQDDYTMKCLVTTESCKPSVKAKICNIPLEDLTNYKMSYVPHPV
                     EKRFVKEAEKYIPCDIPFENLTTHKESYRGLLGEPAKSSKPPGKIPVHDVPFSDITEI
                     QEKYQAWPTPQIVPKAPVVYVPPEEKMDLLTTVQTHYKHRKGSPAITCRPVPSIKKSG
                     RFQSSTTSKDDFKQWAAVNTKPIRPVPHLNLPVEPLDCQTTTKICYVPHPPTITENYK
                     PAWVGPRRNIPVEGQTTYSISFTPKDLGRCPASYINPPGYIFEEVDSTGHKIYRSISQ
                     TASRQNSSLSIHDVEKPGQKELQVSS"
ORIGIN      
        1 cctcaagatg ccctcctcta tgaccctgga ggtcatagag gactcagtcc tgggccctgc
       61 cgcttgtagg cgccaggctg cttgtagcag gtgcgcactt cccagcggcc ggctgcagtg
      121 agggcaagct tgtagatgtg agccggcctg gcttgctatc tgtgcccagt gctgcttgtt
      181 tgcccaaggc cagcctcagg acgggaatag attacagaat tttgcaaagg gccacctaag
      241 ttttcttctg agcaaaacag catctgtttt gtgattgatc gttgtcccag gcagctggga
      301 tcctacagga gacttcggtg gtggaaggtc cgaggtgaag gatggggaag cggacttgca
      361 tctgcaatct gtgcacctgc gggcggcatc gctgtccaca tctccctacg aagatttatg
      421 ataaaacaga gaaaccaagt cttctctccg agtatactga gaattatccc atctatgagt
      481 cttacctgcc tagaaattcc ttcaagcccg agtgcgccta ccagaaagca tctataccga
      541 tggaaggcct gaccacatcc aggagagact ttgggcttca caaaatgtta cctgtgaaat
      601 tctaccagcc tgccgcatac gttccgagtc aagagagtat gaatctactc acctcgtata
      661 aacacgattt taactacatc cctacctgtc cagttggcct catcaaacct cgggacagta
      721 aatttccgaa tggtgacaag acagtacaat atctgcctac ctacaaagtt gattatgtac
      781 cctggaacca accaagacgg gagcttcttc gtcctccaca caagtaccgg ccggagtctg
      841 ccaagtttga aaacagaacc acacatcagg atgactatac catgaaatgc cttgtgacta
      901 ctgagagctg taagccttca gtcaaggcaa agatctgcaa catccccttg gaagatctga
      961 ctaactacaa gatgagttat gtgccccacc ctgtggagaa gcgcttcgtt aaagaggcag
     1021 agaaatacat accctgtgat atcccctttg agaacctgac cacccacaaa gagtcttaca
     1081 gaggcctcct aggggagccc gccaagagtt caaaacctcc aggcaagata cctgtgcatg
     1141 atgtaccttt ctcggacatc accgagattc aggagaaata ccaagcttgg ccaacgcccc
     1201 agatagttcc caaagctccc gttgtgtatg tccctcctga ggagaagatg gatcttctga
     1261 caactgtgca gacccattat aaacaccgta agggtagccc tgctataact tgccgacctg
     1321 tgccttccat taagaagagc ggccgcttcc aaagctctac cacttccaag gatgacttca
     1381 agcagtgggc agctgtgaac acaaaaccaa tcagacctgt tccccatctg aacttgcctg
     1441 tggagccttt ggactgccag accaccacta agatatgcta cgtgcctcat ccacctacca
     1501 ttactgaaaa ctacaagccc gcctgggttg gccctcgaag aaacatccct gtagagggtc
     1561 agactactta ttccattagc tttactccca aggatttggg caggtgtcca gcatcataca
     1621 taaacccccc aggctatatc tttgaggaag tggatagtac ggggcacaag atctataggt
     1681 caatttctca gacagcttct aggcagaaca gctctctttc tatacatgat gtggaaaagc
     1741 ctggtcagaa agaactacaa gtgtcatcct gactgtgaaa aaaattaaaa acctgcaaat
     1801 accagaaaac taaaaattat ccattgaaga agaatttccc aaaatgaaaa aatattaaaa
     1861 tacctacctc agaatgaaaa acaaaaccat cactaattcc aggatatttg aaataacaca
     1921 aggatcactt gaataaagaa aaatgacatg ta
//
