LOCUS       NM_001004069             852 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus suppressor APC domain containing 1 (Sapcd1),
            mRNA.
ACCESSION   NM_001004069
VERSION     NM_001004069.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 852)
  AUTHORS   Hurt,P., Walter,L., Sudbrak,R., Klages,S., Muller,I., Shiina,T.,
            Inoko,H., Lehrach,H., Gunther,E., Reinhardt,R. and Himmelbauer,H.
  TITLE     The genomic sequence and comparative analysis of the rat major
            histocompatibility complex
  JOURNAL   Genome Res 14 (4), 631-639 (2004)
   PUBMED   15060004
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX883045.1.
            
            On Sep 30, 2009 this sequence version replaced NM_001004069.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN06621351,
                              SAMN06680412 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-121               BX883045.1         226568-226688       c
            122-262             BX883045.1         226201-226341       c
            263-355             BX883045.1         225630-225722       c
            356-852             BX883045.1         224901-225397       c
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..852
                     /gene="Sapcd1"
                     /gene_synonym="Ng23"
                     /note="suppressor APC domain containing 1"
                     /db_xref="GeneID:406170"
                     /db_xref="RGD:1359359"
     exon            1..121
                     /gene="Sapcd1"
                     /gene_synonym="Ng23"
                     /inference="alignment:Splign:2.1.0"
     CDS             8..451
                     /gene="Sapcd1"
                     /gene_synonym="Ng23"
                     /codon_start=1
                     /product="suppressor APC domain-containing protein 1"
                     /protein_id="NP_001004069.1"
                     /db_xref="GeneID:406170"
                     /db_xref="RGD:1359359"
                     /translation="MESPGPGELPLVQAPYTVLLLPLGTSHQDPGAQNFFLWLQMMQA
                     LEREQDALWQGLELLEHSQAWFADRLRETQQRQLQLGALGEGFLMDSHSETATPQLTR
                     IQKVNACLRSLIQKELSKQQKGVSHRTGEVISQAPPPGAKGPTLV"
     exon            122..262
                     /gene="Sapcd1"
                     /gene_synonym="Ng23"
                     /inference="alignment:Splign:2.1.0"
     exon            263..355
                     /gene="Sapcd1"
                     /gene_synonym="Ng23"
                     /inference="alignment:Splign:2.1.0"
     exon            356..852
                     /gene="Sapcd1"
                     /gene_synonym="Ng23"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagagccatg gagagcccag gtcctggtga actacccctg gtgcaagcgc cctacactgt
       61 tctgctgcta cccctgggga caagccatca agacccaggg gcccagaact tcttcctctg
      121 gctgcagatg atgcaggctc tggagaggga acaagatgct ctgtggcagg gcctggagct
      181 gctggagcat agccaagcct ggtttgcaga ccgtctgagg gaaacacagc aacggcagct
      241 gcagctgggg gcccttggtg agggctttct gatggactca cactcagaga ccgccacccc
      301 tcagctaacc aggattcaaa aggtgaatgc ttgtttgcgc agtctgattc agaaggagtt
      361 gtcaaagcag cagaaaggag tcagccatcg aacaggagag gtgatcagcc aggctccccc
      421 accaggagca aaggggccta cccttgtgta aaccctcccc tccctgcact ggtgtaagga
      481 gtggggttgg agtcagagtc ccctgcccct gcccctgccc ccctcatcta tttaatcttc
      541 attcagcagc cagtggctcc aggctgagaa attcagacaa ctcagtagag tgctcctgca
      601 actcctaaaa gtgtccaccg cacttccttg acatcccttg ccctccctct cccccatgcc
      661 actacaaagc cctgtctttc ttcagtgtat ttggggagga ggcgtgatca aggagactct
      721 ccttcagctt gaagcaaaac taagctaaaa aagctgccct ggaatttaaa ggaaaattgt
      781 actttctggt gcccctgccc tgctctgctt ctggaataaa cagcagctct cttaaaaaaa
      841 aaaaaaaaaa aa
//
