LOCUS       XM_008769160            1397 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Sin3A-associated protein 25 (Sap25),
            mRNA.
ACCESSION   XM_008769160
VERSION     XM_008769160.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008769160.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008769160.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1397
                     /gene="Sap25"
                     /note="Sin3A-associated protein 25; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 157
                     samples with support for all annotated introns"
                     /db_xref="GeneID:288559"
                     /db_xref="RGD:1562406"
     CDS             598..1317
                     /gene="Sap25"
                     /codon_start=1
                     /product="histone deacetylase complex subunit SAP25"
                     /protein_id="XP_008767382.1"
                     /db_xref="GeneID:288559"
                     /db_xref="RGD:1562406"
                     /translation="MTPLPLWDPSHQANTGPQLLGASCGSGISLSNRTLCHPSWPMYD
                     DWGRMPTTSGHPEEKQVASRGTGLPVRNSEEVFLLDPLLSPGQRVPLYLPKPPQQVRM
                     SLPTFSLPFSIQSQWDKLPFPSSQAMGSLKLLLPPPIMSSSVQPSSSQGCPFSSQARP
                     PSSQARPPTWLSEAEMIALAGLLQMSQGEQTPDSQASSLPSASCPDPAYVSEDPGPNG
                     GQSCSGSTDPRPTQNPDNHRP"
ORIGIN      
        1 acacggtggg agcgtgccac gtggctggcg aaacgctagc gcaggcgttg tggcaacacc
       61 tctgaggggg ctagggcttg ggcgctcatg tagtcagggc ggcacgcaag cacggcggtg
      121 ggtattgcct ggtgcttcac cagacgcagg atgttgcctt ggcttgggcc atggggcaca
      181 ggccaggagg aggcgacgga ggggctagac ctctccacgg gcagtgacca gggagaggcc
      241 tggagctctg gagaggagac tatggaaaag caacaaacgc ctgtgcagga caggtgaggg
      301 cgtggtgggg gccgctagga ggcgttgtgg gctcttcccg aaaaagaatt atccaggagg
      361 tcggtacagg aagtgggtat attgcttgtc ctgcgactga ctcaggtcag ctttaggaag
      421 ggaagtgagt tgggaagcct gtccctccct tctcacagct cacagcccca ggcactcagc
      481 ccatcggaga cagaaagaaa gcagctgctg cctttcaggc acctggctac tgagttgact
      541 gcagaagccc cagtacctct ttctccctgg aggacctacc aggtcacccc ctcaaggatg
      601 actcctctgc cactttggga tcccagccac caggctaata caggacccca gctgctgggg
      661 gccagctgtg ggtcagggat atctttgtct aacaggaccc tgtgccatcc ttcttggcct
      721 atgtatgatg actggggcag gatgcccact acctcaggac atccagaaga gaagcaggtg
      781 gcatctaggg gcacagggct cccagtgaga aactctgaag aagtctttct cttggaccct
      841 ctgctatccc ctgggcagcg tgttccccta tacctgccca agccccctca gcaggtgaga
      901 atgagcctcc ctacattctc tctccctttc tccattcaga gccagtggga caaacttccc
      961 ttcccgtctt ctcaggcaat gggctcacta aagctgttgc tcccgcctcc tatcatgtcc
     1021 tcctctgtgc agccctcctc ctcccaaggc tgccccttct cctcccaggc ccgccccccc
     1081 tcctcccagg cccgcccccc aacctggctc agcgaggcgg agatgatcgc ccttgctggt
     1141 ctgctgcaga tgagccaggg agagcagacc cccgactccc aggcaagctc cctgccttct
     1201 gccagctgcc cagaccctgc ctatgtctct gaagaccctg gccccaatgg tggccagagc
     1261 tgttctggaa gcactgaccc acgacccaca cagaaccccg ataaccaccg tccatagtgt
     1321 cccctcccct ccctccacag gggctgtctt ctctcctaag ccgttttgtt gacaataaat
     1381 cagagtgtgc aaaccag
//
