LOCUS       XM_001065393            3354 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus spermatogenesis associated multipass
            transmembrane protein 2 (Samt2), transcript variant X1, mRNA.
ACCESSION   XM_001065393
VERSION     XM_001065393.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001065393.7.
            
            On Jan 21, 2021 this sequence version replaced XM_001065393.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3354
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3354
                     /gene="Samt2"
                     /note="spermatogenesis associated multipass transmembrane
                     protein 2; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:685819"
                     /db_xref="RGD:1589067"
     CDS             169..906
                     /gene="Samt2"
                     /codon_start=1
                     /product="uncharacterized protein Samt2"
                     /protein_id="XP_001065393.2"
                     /db_xref="GeneID:685819"
                     /db_xref="RGD:1589067"
                     /translation="MGHFTPNTKRFAEVKEWIFRVTGFICSLLSLGFEIILASSRYWR
                     LWEFDNNVVQLVYIGLWEAYYHWEFNFSDTETIILVHSSVNSTWTISPEFQCARNLML
                     LTILIKPVVVIFSSAAIRVSIIKSSVHEIQIVCYKCSVLILIITSLCTIISVTWNHVV
                     DFYGITTLDFPPTFPVKKEALIKKHSTHVFPLGLLTTTLSLFGVIMFLFEIRSLKAQS
                     KMNAQHDLKQADDSSINEGSGICEMCQ"
ORIGIN      
        1 tggaaacatt agaatgtgta cagttactta tttcttttga ggatggcagt tgccaacatt
       61 tggtcttcct agaagagaga caaaaaggtt cttcatcgct atttgtgact accactctga
      121 tcaatattac tagtgattta aaagattggt aatattgtca tctgccaaat gggtcatttc
      181 actcccaaca ccaaaagatt tgcagaggta aaggagtgga tcttcagagt tactggcttc
      241 atttgcagcc tattatcttt ggggtttgaa ataatccttg caagcagcag atactggcga
      301 ctctgggaat ttgacaataa tgttgtccag cttgtttaca ttggactctg ggaagcttat
      361 taccattggg aatttaactt ctctgatact gagacaataa ttctggtaca cagctctgtc
      421 aactcaacct ggacaatttc acctgaattt caatgtgcac ggaacctgat gttactgaca
      481 atcctgataa aacctgttgt tgtaattttt agctcagcag ccattagggt cagcataatc
      541 aaatcctcag tccatgagat tcagatagta tgttacaagt gctcagtctt aattctgatc
      601 atcactagcc tttgcaccat tatttctgtg acctggaacc atgtagtcga tttctatggc
      661 ataaccactc ttgactttcc accaaccttt ccagttaaaa aagaagccct gattaagaaa
      721 cacagcactc atgtgtttcc attggggctc ctgacaacca ccctgtcact ctttggtgtg
      781 attatgttcc tctttgagat aaggtcactg aaagctcaga gtaaaatgaa tgcccagcat
      841 gatttgaaac aagctgatga cagttccata aatgagggtt ctggaatttg tgaaatgtgt
      901 cagtagacta cctgacaaaa tttcctgcat gcacacagta ctgctgtagt tatttactta
      961 cataaaataa agtatctcaa tgaatctttt ggcatttttc ttaagctttt gtcttctgct
     1021 tggtgaatgt gttcccttct tccaagatat tcacatccta aactcttcat tctaagatga
     1081 tgtgttcagt tattgccaat tccattttgc ttaaaaaagt actgatgaag taaaaattcc
     1141 ataaaccgaa gaaccaaaac taaggcgaaa gttttcttga aaagtaagca aacaaacaaa
     1201 caaaaccaat gcatacgagt tgaaatacat gccaagtgga gaattgtaac ccctaatgta
     1261 tattgaatgt agagtagtac atccaacatt tgacacgact gaaatttaga gtttcttgaa
     1321 ggcaggaaga gatactgatc actgattatg catatagcct ctgaagattt tcacagaagt
     1381 tactttcgaa aggcccatgt attttaagtg tgtatgaatg cacaaaagga atctctgtag
     1441 ggaacaactg ggtagtacat tgtcattttt atgtgtataa gctctctgga ggatagaaga
     1501 ttatacttag tactactaac tcccaaataa ttctctggat ccactcattc tcaaagaata
     1561 agcaagtgct cctacagaaa aaaaatagaa aaccctatac taattgaaga gacagttgat
     1621 ggaacagata ttctgaattc atcagaggag aaaaatggag tcagcaagag tagggagtga
     1681 gtcaggtgca acctgtgctc tggatcttgt agctgtgact gagtagcaat cagactgctt
     1741 ctgaagctct gacttactag caaccagatt gtatctttat ttatatagca ctttcataga
     1801 acaaggaaag actaatcatt atcaaagagg tacatattgt ttgtttgaaa tttcattaca
     1861 tgttcaaact aacaggtcca gtcacaagta gaaaatagaa tcaaaactga ttttttttat
     1921 tgtcaggtct ataactccag tttaaagact ctaaataagg tcccttccaa gcatttcaga
     1981 ttttatatga cagatgcttt ttatgcttgt agtgttttca gttttaaata attccagtca
     2041 aacagaaact atctgaacaa gatttcttcc gaatagcaaa tataacagct aattaattta
     2101 atttatactt ccttacttac agagatattc atcaatctct gtttgttact gagttctatt
     2161 cctccacggt gtatgccttg tatgaccccc ttttcttgaa ctatattctt agctaataca
     2221 ggtgtattag aaagagaaac catgcatctg tgaagtagtc ctctggacag tcagaatttt
     2281 tccattgctt acattaactc tgaaacaatt atactgtttg tgtttgttca gaggcagaga
     2341 cccccaaaag aatcctggtg taataacctc atcacttttc tgtgtactca tgtactttct
     2401 gtgcttaatg atcttaagtt cataaggaaa atggacacat acataagtca agataaaact
     2461 aattttagaa tttttctaga aatactcaaa tataatttat tccatgaaag tcctaaaatg
     2521 aagtataatg cagaaagtcc tcaggaatgc aacaaacaga ctccaaatac ccaaagtgac
     2581 agatggaatg acagtgattg caccatttca gttcaggttt gctggtacta agtcaaacag
     2641 ctgccatggt ttcatgtcta ttcctgggta caatagttat ggatgtgact ccttagttta
     2701 ttgttttatc ttatgatgtt tttctctcct ggataggttg gcactaatga cttaaactaa
     2761 tatttatctc tatggatttc atttaatagt caccggtgtg ttacggtgga tatagatatg
     2821 ggcaatattt ttctgctaag gcagctaaaa atggccatgt tcttttgttt ctacactgtc
     2881 ctatatacac aaaggataaa tatctacaga acaataaccc atgagttgac attgtcgaat
     2941 tcttaacata ggcttcactg tcttcttgag ttcttatttc acatttttcc agaggatgag
     3001 cttctaaatc agtgctatat gtttatttac tctccatgaa acttggtctt tcgctttcat
     3061 tacacaaaac atactgtaca ggatatttga ttcattagtg gaaaaaaagt caacataagc
     3121 aactcatgga aggaaatttt tttggctctc aatttgaaag aatgttatga aaagaatgcc
     3181 cgggagaaca ttacccagtt cagcagtaga tttgagcgca gatagtcatg gtttttatct
     3241 tacattttat ttgtttatgc accctgtgct cacagcctat ggaatggtga cacctacaat
     3301 tggtctatct tcccacctca ttgaatccat ggaagtaaat gtggaaatct taag
//
