LOCUS       NM_001191703            3265 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus sterile alpha motif domain containing 7 (Samd7),
            mRNA.
ACCESSION   NM_001191703 XM_226973
VERSION     NM_001191703.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3265)
  AUTHORS   Hlawatsch,J., Karlstetter,M., Aslanidis,A., Luckoff,A., Walczak,Y.,
            Plank,M., Bock,J. and Langmann,T.
  TITLE     Sterile alpha motif containing 7 (samd7) is a novel crx-regulated
            transcriptional repressor in the retina
  JOURNAL   PLoS One 8 (4), e60633 (2013)
   PUBMED   23565263
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Oct 5, 2022 this sequence version replaced NM_001191703.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760383 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-95                JAXUCZ010000002.1  114572680-114572774 c
            96-218              JAXUCZ010000002.1  114567957-114568079 c
            219-343             JAXUCZ010000002.1  114566016-114566140 c
            344-422             JAXUCZ010000002.1  114565168-114565246 c
            423-1033            JAXUCZ010000002.1  114562694-114563304 c
            1034-1152           JAXUCZ010000002.1  114560840-114560958 c
            1153-1263           JAXUCZ010000002.1  114557229-114557339 c
            1264-3265           JAXUCZ010000002.1  114551640-114553641 c
FEATURES             Location/Qualifiers
     source          1..3265
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q24"
     gene            1..3265
                     /gene="Samd7"
                     /note="sterile alpha motif domain containing 7"
                     /db_xref="GeneID:310257"
                     /db_xref="RGD:1308931"
     exon            1..95
                     /gene="Samd7"
                     /inference="alignment:Splign:2.1.0"
     exon            96..218
                     /gene="Samd7"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..1458
                     /gene="Samd7"
                     /codon_start=1
                     /product="sterile alpha motif domain-containing protein 7"
                     /protein_id="NP_001178632.1"
                     /db_xref="GeneID:310257"
                     /db_xref="RGD:1308931"
                     /translation="MANPMMSVNSLLTAGPQRVSMVPSPFGPPIGDRDALPSTIAPTD
                     PSQFCVPSQFGSSGLPSANTPNPLPGHFYSGWGILPPEPIKAVTTRNEMFERHHAARA
                     EMEMYSLYQQRRMERVNPKGLSGLGIPLFYGSGCLGGPAGFQGRSTLPASDVHVHRST
                     FRHLQGNPVLLATRPHFTECWGQKYRLRRGTVYQKPPEIDTESFKSQADEKSSGQMPT
                     APYEEEEYIKDPEIGVDNQQEPRVTDGNPTAVLANPHGEPQPNQRKPSSMEAKAWDDG
                     KGEPSEQGYEGCDEKNGVCLPASTLPLPGTQEPVALQENRPLSDIHKWTVDDVYNFIR
                     SLPGCSDYAQVFKDHAIDGETLPLLTEQHLRGTMGLKLGPALKIQSQVSQHVGNMFCK
                     KLPSLPSHARQAFDQPADTSPLLAIGSWRDGLSIPGSQDIMSPERAEQDVMRN"
     exon            219..343
                     /gene="Samd7"
                     /inference="alignment:Splign:2.1.0"
     exon            344..422
                     /gene="Samd7"
                     /inference="alignment:Splign:2.1.0"
     exon            423..1033
                     /gene="Samd7"
                     /inference="alignment:Splign:2.1.0"
     exon            1034..1152
                     /gene="Samd7"
                     /inference="alignment:Splign:2.1.0"
     exon            1153..1263
                     /gene="Samd7"
                     /inference="alignment:Splign:2.1.0"
     exon            1264..3265
                     /gene="Samd7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcggattcg tatttaaggt gaagtttacc ttccttaaga aagagctgtc agagggggca
       61 tccaccaagc acccgagaag ctgctgcagc agaagaattc caccagagtc aagaaatctg
      121 atggcaaacc caatgatgtc ggtgaactct ttactgacag caggaccaca gagggtctca
      181 atggttccct cgccatttgg gcctccaatt ggggacagag atgccttgcc ttccactata
      241 gctccaactg acccaagcca attttgtgtt ccttcccaat ttggatcctc tggtctccca
      301 agtgcaaata cgccaaaccc actgccgggt cacttctact caggctgggg tattttacca
      361 cctgaaccca taaaggcagt gaccacaagg aatgagatgt ttgaaagaca tcacgctgcc
      421 agggcagaaa tggaaatgta ttctctttac cagcaacgta gaatggaaag agtcaatccc
      481 aaaggactct ctggtctggg gataccactc ttctatgggt caggttgtct gggtggcccc
      541 gcaggtttcc agggcaggag cacactgcca gccagtgatg tgcatgtgca cagaagcacc
      601 ttcagacacc ttcagggaaa ccctgttctg ctagcaacta gaccacactt tacagagtgc
      661 tggggccaga aataccgact caggagaggt accgtttacc agaagcctcc agagattgac
      721 actgagagtt tcaaaagtca agcagacgag aaaagctcag gccagatgcc cacggctccc
      781 tatgaagagg aagagtatat caaagaccca gaaattgggg tagacaatca gcaggagcca
      841 agggtcactg atggaaaccc aactgcggtc ctcgccaacc cccatggaga accccagcca
      901 aaccagagaa aaccctcttc catggaggcc aaggcatggg atgatgggaa gggagagccc
      961 tccgagcagg gctatgaagg ctgtgatgaa aagaatggag tttgcctgcc agcctccacc
     1021 ctgcctctgc caggaacaca ggagccagtt gcacttcagg aaaaccgtcc tttgtctgat
     1081 attcacaagt ggacggtgga tgatgtgtat aacttcatca gaagtcttcc aggctgctca
     1141 gactatgccc aggtctttaa ggaccacgcg attgatggag aaacactgcc ccttcttaca
     1201 gaacagcatc ttcgaggcac catgggactc aagctgggcc cagcactgaa aattcagtct
     1261 caggtatctc agcatgtggg aaatatgttc tgtaaaaaac ttccttcact tccctcccat
     1321 gcaaggcaag catttgatca gccagcagac acatcccctc ttttggctat tggttcctgg
     1381 agagatggat tgagcattcc tggttcccag gacataatga gtccagaaag agctgaacaa
     1441 gacgttatga gaaattaaaa acactccaag acacagaagt ccctcttggt tttctagagt
     1501 tccagatgtt accagccccg tgcgaggtct tcctgggacc aggtggtgga caaagagagc
     1561 aaaaccaagc tcacagagtt ttcttggaag gatctcaccc aacaggcttc ctgccaagct
     1621 gaagcaaacc aagcaccaag gttctgaaga attgccctta ggagaaaata caaatgggga
     1681 tgggaattta caagcacctt gcaagctaca atctgatgac tctgtgagga aattctgaag
     1741 aaactgagag cagaagctga aaaggaactc cttctcctcc cttccatcgc ccaaccatga
     1801 tagtgacgca ggtgctgatg ggaggaggct gggcaaaact gagcacagaa agcaccttat
     1861 ctcctgccag caactgctag cctggagtag gcccgatgag ggtgaagttc tggagtaggc
     1921 ccgatgaggg tgaagtttgt atttaccagt ggggtaggga aaagttatct gtatgtaaca
     1981 ggtcggaact agtgagaggg aagtgatgat taaggtggct gtgtacgctc catgtggagt
     2041 cccagtcttc caacttaata tttcacagaa tgtctctaaa gggacacaca cacacacaca
     2101 cacacacaca cacacaggca acagtttgat cagaggggac tggctggcga gcataggaag
     2161 aagtcttagt ttgaaaattc tgaattgtga accatgagaa tgtgtgtctc actcacagaa
     2221 cattctcctt tgaagtaaac aaaccccagc aggaagccct taagatagcc cacagtccca
     2281 cagtctagtg tgcttgccct tgtatacccc tcccctgaga gcatgctgga ccaaagaaac
     2341 ccaccttcct aatgaagcac acctttaggg tctggcaggg atcactcctg tggcttctaa
     2401 cccatttcta tgtcagtttc cctctcaaag cagccctagg tagagagcct tgagtgacta
     2461 gccttaacag tgaacacccc ggagcctgcc aacagcctcc tgcctttctg gtatgtgaaa
     2521 acgccgtcca cagcctaatg ccagctcaca agaccttggt ccaggctccc tgctaggtcc
     2581 ttgaccaccg aactgttgtc acatgcaaac ttgttgtttt cagttgctgc agggtccttt
     2641 cacagccacg gagaattgaa acatagattt aacttagtga cgcagagagc gcagtactaa
     2701 ctccgctttt catctggaag gtggactccc gaagcccttt ccccagagct ctcacttagt
     2761 tgtgttttgc taatttggtt tttgtttttc ctccaagaca acatgtgttt tgtcttatat
     2821 aaaacttatt tatgccatgc atgtgttcat gcaggcatta gtgtgagttt agactttgaa
     2881 actggaaaga gcaaatagag tttggagaat taagttgagg accgtggccg tgtgtggtgt
     2941 gagtggaaat gaggatcctg ggagtgggag gacattggag gggctcatgg atgggcaaag
     3001 gggtggggga gaatcagcac aacagtctct gcttgaaaat ctcagcatca aaactaatac
     3061 cacgtatgat aagttttaaa ctaatttgta aaagcctgtc attccatcaa tgcttgcaca
     3121 tttctagctt aagctccttg tcactttgat gagggtcagc cagaaagcag aaaatcccca
     3181 caagtttcac atttttatta atttttccta agatggcaac aagctggtgg ataacatgtg
     3241 tcagggttct gattaaaagt aactc
//
