LOCUS       NM_001108901            2490 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus sterile alpha motif domain containing 5 (Samd5),
            mRNA.
ACCESSION   NM_001108901 XM_001069146 XM_344792
VERSION     NM_001108901.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Yagai T, Matsui S, Harada K, Inagaki FF, Saijou E, Miura Y,
            Nakanuma Y, Miyajima A and Tanaka M.
  TITLE     Expression and localization of sterile alpha motif domain
            containing 5 is associated with cell type and malignancy of biliary
            tree
  JOURNAL   PLoS One 12 (4), e0175355 (2017)
   PUBMED   28388653
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473994.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_344792.3, XM_001069146.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5756307,
                              SAMEA5760383 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p13"
     gene            1..2490
                     /gene="Samd5"
                     /gene_synonym="RGD1311012"
                     /note="sterile alpha motif domain containing 5"
                     /db_xref="GeneID:365038"
                     /db_xref="RGD:1311012"
     exon            1..747
                     /gene="Samd5"
                     /gene_synonym="RGD1311012"
                     /inference="alignment:Splign:2.1.0"
     CDS             289..810
                     /gene="Samd5"
                     /gene_synonym="RGD1311012"
                     /codon_start=1
                     /product="sterile alpha motif domain-containing protein 5"
                     /protein_id="NP_001102371.1"
                     /db_xref="GeneID:365038"
                     /db_xref="RGD:1311012"
                     /translation="MCTNIVYEWLKALQLPQYAESFVDNGYDDLEVCKQIGDPDLDAI
                     GVLAPAHRRRILEAVHRLREQDAAAAGLYFTLEPQPVSPAPLVDAVPPSRRGEPCGGS
                     AQGTRGDPRGQPSAPRSRELVSYPKLKLKIMIRDKLVRDGIHLSKPPYSRKVPMAGIL
                     EYLMNWPKSSQNR"
     exon            748..2490
                     /gene="Samd5"
                     /gene_synonym="RGD1311012"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcatccaggg gcggcgcgga gccgagccgt tcgcccagcc gccagtgccc gcgagcgccg
       61 cgcctgctcg gggaatccac ttcgctgcta gacgctcctc gttcacgctc gctccctccg
      121 cggctgcttc ccatggcttt gactctgcgg ccggagccta accactaacg gagaaacttt
      181 tcctgccgtt tcttctctcc acccccttcc acgagaggat taaaagttgc aagaactggt
      241 gcggtccgtg tcacttgggt actagccggc gagttccgag tctcagccat gtgcaccaac
      301 atagtttacg agtggctgaa agcgttacag ctccctcagt acgcggagtc cttcgtggat
      361 aatggctacg atgacctgga agtgtgcaag cagatcggag acccggacct ggacgccatc
      421 ggggtgctgg ctcccgcgca ccgccgccgc atcctggagg ctgtgcaccg gctgcgggaa
      481 caggacgctg ccgctgccgg cctctacttc acactcgaac cgcagcccgt gtcacccgca
      541 ccgctggtgg acgcggtgcc cccaagccgc cggggggagc catgtggcgg ctcagcccag
      601 ggcactcgcg gggacccccg tggccagcca agcgctcccc gcagcaggga gctggtgagc
      661 taccctaagc tgaaactgaa gatcatgatc cgggataagc tggtccgcga tggcattcac
      721 ctgagcaaac ccccatactc gcgcaaggtc cccatggccg gcatcctaga gtacttaatg
      781 aattggccga agtcatcaca gaaccgctag atatcatttt tgaaagcccg tgttggactg
      841 atgaggtgcc gaagactgga aaggggcgta cttagaacgt tctttcacaa ggggaactgg
      901 atggtgactc tgcaaacact catcagctta actttttgct cggaaaattc tggaattatc
      961 agcttagtca gccgagtaac tcacgtgtag tagtcaggag agaggcagtg acagaccacc
     1021 tatggaaata tgttggattt gattttcagt ggacactcca tgtggaaaga agtctgatac
     1081 atctcttgga atttctctcc tttgttcttt gaattttttt tcatcatcat agatggggtt
     1141 gactaagact tgtggggaat tactaatttt aagcaaacta cgtaaaatag gtttcttaca
     1201 atagctactt aattagatag ctttcaaatt agcctctgtc tcgagaacag tagccttcat
     1261 tttatttttt agcatacatg ttattttact tcgtacaggg ccttgttttc gttaagttac
     1321 aatatttcat ataattctat ataagctagt ttgggggaag gaactcttat tttaggtact
     1381 ttatatagtg gtttcacatc taagtgtagc cataacactg acagattaag gaagaaatta
     1441 tttttctggg ttttcagttt taatctggtg gagggatgac tgttacatta ggagtgccat
     1501 agcccataca tgtcagctct tcatattctt ctttgtcctt gcccaccttc cccagatgct
     1561 ttctctcaaa ctcccccatc cccctatgct tctgatatca ggtgttgggc agggaagtgg
     1621 gccttggcag tgggcaagag gagccttgtc ccatctgtgc acaaggagaa taaaggaaaa
     1681 gggaaggaaa cctggagtat ttttttttta cttcctcatc attatttcct ttgggtgttg
     1741 ctagtccact tttctgctaa gaaaatacaa ccctggtgat ggggtctaaa cctcgctgag
     1801 gaagggctcc aggtgatttg acaatgttag caagcatctg acgctggcaa gtctagagag
     1861 cccctcggat gtactgtgct tgtggaaaca tcgtttcacg actcaggagt agagcaaaga
     1921 tgcagcttgt atcactgcaa ttatggacat gaacagcaaa ctttcaaagg caagagactg
     1981 acagtcactt tgtctctaga aataggtagc cgattaagaa gggattacat ctccagaggc
     2041 gtttcatgcc ataatactgt tttttgtttt tgtaatctaa agtttaacca ctagagctgc
     2101 ctttagagat gattttaggc actgcgcaaa gcctttcttg agctttaaat acaagtgtaa
     2161 ggaaattaag ttctaagagc acgtgtgtga gttgtccctt atgagccaca tacagtcaat
     2221 tgcttgtcac cttttcaaat aagctgatct gtaaaatacc tgtttgattt tttttaaaga
     2281 ggtgtgggtg tctgcataga ttactgatat gatttattgt gataataaac ggcttcctgg
     2341 ttgaggcctc atttccaggt gccgcatctg tggcagattt atttcgcaga tgtacatttg
     2401 catgcatttg ttgaactgtg gctagcaagg acccaatttc tgaaaaaatc tattattttc
     2461 cctggaggca atagaataaa atcctctacg
//
