LOCUS       NM_001107498            4298 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus sterile alpha motif domain containing 4B
            (Samd4b), mRNA.
ACCESSION   NM_001107498 XM_001073474 XM_001073503 XM_001073537 XM_218384
VERSION     NM_001107498.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4298)
  AUTHORS   Amadei,G., Zander,M.A., Yang,G., Dumelie,J.G., Vessey,J.P.,
            Lipshitz,H.D., Smibert,C.A., Kaplan,D.R. and Miller,F.D.
  TITLE     A Smaug2-Based Translational Repression Complex Determines the
            Balance between Precursor Maintenance versus Differentiation during
            Mammalian Neurogenesis
  JOURNAL   J Neurosci 35 (47), 15666-15681 (2015)
   PUBMED   26609159
REFERENCE   2  (bases 1 to 4298)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473979.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_218384.3, XM_001073537.1, XM_001073474.1, XM_001073503.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..4298
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..4298
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /note="sterile alpha motif domain containing 4B"
                     /db_xref="GeneID:308473"
                     /db_xref="RGD:1305597"
     exon            1..403
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     CDS             208..2271
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /codon_start=1
                     /product="protein Smaug homolog 2"
                     /protein_id="NP_001100968.1"
                     /db_xref="GeneID:308473"
                     /db_xref="RGD:1305597"
                     /translation="MMFRDQVGILASWFKGWNECEQTVALLSLLKRVTRTQARFLQLC
                     LEHSLADCNDIHLLESEANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYM
                     RLLQKVLAYSIESNAFIEESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRT
                     RPEPSYHSRQGSDEWGGPAELAPGEAGSGWQDKPPRENGHVPFHPSSSVPPAINSIGS
                     NANTGLPCQIHPSPLKRSMSLIPTSPQAPGEWPSPEELGARAAFTTPDHAPLSPQSSV
                     ASSGSEQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQ
                     HLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIK
                     AYSVLQATPTAKDGGRGEPLLPGAEPPLTHPGSDKGTEAKDPPAAENYPPPPAPAPSD
                     SSEPAPAPVADGDIPSQFTRVMGKVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTET
                     QKKRLLSWKQQVLKLLRTFPRKAALDMQSYRQQKGWAFGSNSLPIAGSVGMGVARRTQ
                     RQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTSPSLGGQGRQNLWFANPGGSNSMPS
                     QSRSSVQRTHSLPVHSSPQAILMFPPDCPVPGPDLEINPTLESLCLSMTEHALGDGTD
                     KTSTI"
     exon            404..874
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     exon            875..1114
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     exon            1115..1224
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1311
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     exon            1312..1630
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     exon            1631..1716
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     exon            1717..1835
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     exon            1836..2034
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     exon            2035..2158
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     exon            2159..2242
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
     exon            2243..4298
                     /gene="Samd4b"
                     /gene_synonym="RGD1305597"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagcctggag aggtgtggct ggaccaagac ctcccctgat gtaagcaggc tccctcctcc
       61 cccccaccac ccgttgccac cacgccaggg gacatcctca agccctggcc cttaggggag
      121 aggtaacagg agcccagagc cgagaccatg tgacggcgct ggcccttgcc accgccgtcc
      181 cccaaccctg gccccaggcc tggcaccatg atgttccgag accaagtggg catcctcgct
      241 agctggttca agggctggaa tgagtgtgag cagacagtgg ccctgctgtc acttctgaag
      301 cgggtcaccc gtacccaagc ccgctttctg cagctctgcc tggagcactc actggcggac
      361 tgcaatgata tccacctgct ggagtcagag gccaacagtg ctgccatcgt cagccagtgg
      421 caacaggagt ccaaagagaa ggtggtgtcc ctcctgctgt cccatctgcc cctgctccag
      481 ccaggcaaca cagaggccaa gtctgagtac atgagactgc tgcagaaagt gctggcctac
      541 tccatcgaga gcaatgcctt cattgaagag agccgccagc tcctctcgta tgccctcatc
      601 cacccagcca ccacgctgga ggaccgcaat gcactagccc tctggctgag ccacctagaa
      661 gagcggctag ctagtggttt ccgcactcgg ccagagccct cctaccattc acgccagggc
      721 tcagatgaat ggggcggacc tgcagagctg gcccctggag aggcagggtc aggctggcag
      781 gacaagccac cccgggaaaa cggacacgta cccttccacc catccagctc tgtgccgccg
      841 gccatcaaca gtattgggag caatgcaaac acaggtctcc cctgccaaat ccaccctagc
      901 ccactgaagc gctccatgtc actcatcccc acgagccctc aggcccctgg tgagtggccg
      961 agtccagagg agcttggggc ccgggctgct ttcaccacgc ccgaccacgc acccctctca
     1021 ccgcagagca gtgtggcttc ctctggcagt gagcagacgg aggagcaggg ctccagccgg
     1081 aacacgttcc aggaggatgg cagcgggatg aaagatgtac cctcgtggct caagagcctc
     1141 cgcttgcaca agtatgctgc tctgttttca cagatgagct atgaagagat gatgacccta
     1201 actgagcagc acctagagtc gcagaatgtc accaaaggtg cccggcacaa gatagccctg
     1261 agcatccaga agctgcgtga gagacagagc gtcctcaagt ccctagagaa ggatgtgctg
     1321 gaaggtggca atctgcggaa tgctctgcag gaactgcagc agatcatcat cactcctatc
     1381 aaggcctaca gtgtccttca ggctacccct actgccaagg atgggggtcg gggggagccg
     1441 ctgctgccag gtgctgagcc tcccctcacc caccctggat cagacaaggg cactgaggcc
     1501 aaggaccctc cagctgcaga gaactatcct cctccaccag ctccagcccc ctctgatagc
     1561 agtgagccag ccccagctcc cgtcgccgac ggagacatcc ccagccagtt tacacgggtg
     1621 atgggcaaag tatgcaccca gctgctggtg tcccgaccag acgaggagaa catcaccagt
     1681 tacctccagc tcatcgaaaa gtgcctgact catgaggctt tcacagagac acagaagaag
     1741 cggctgctgt cctggaagca gcaagtgctg aaactcctcc ggacattccc acgcaaagct
     1801 gctctggaca tgcagagcta ccggcagcag aagggctggg catttggctc caactcgctc
     1861 cccatagctg gctctgtggg gatgggtgtg gcccggcgga cccagcggca gttcccaatg
     1921 cctcctcggg cattaccacc tggcaggatg ggcctcctga gcccttctgg cattgggggt
     1981 gtctctcctc gacatgccct aaccagcccc agtcttgggg gtcagggccg acagaacctg
     2041 tggtttgcca atcctggagg cagcaacagc atgcccagcc agagccgcag ctctgtgcag
     2101 cgcacccact cgctcccagt tcactcgtca ccccaggcta ttctcatgtt ccctccagac
     2161 tgcccggtac ctgggcctga cctggagatc aatcctaccc tggagtctct gtgtctgagc
     2221 atgacagaac acgccttggg tgatgggaca gacaaaacct ccaccatctg acgggaccca
     2281 cagcccagcg cacccatagg ctccctgggc ggcgggcggg gccatccccc aacaggcttc
     2341 tcctcggcag cgagagggtg ggctggcgca gctatacatt ctgatatttt tctactcatc
     2401 ctcttaactt ttgtttaaca ttggcacacg ccttgctcac tcccaggccc attgagggat
     2461 ctcagctgag gccagggaca gagaaggcag ccagaggcaa ggactagcca gactgcctgc
     2521 cccttccctc ctaaatcccc tactggcccc ctcctacccc tgcctccttc agactgctga
     2581 cacctgtcct tccccaagag agcagacttc ctcagagaca aactgacagc caccttgtgc
     2641 agcctgccct tcagacacat gacagtgggg gaatgagcag tgtggagccc atctccctta
     2701 cccccaaccc ttcatcattc ctaccatttc ccaggacagg caccaccttc ctcttttttt
     2761 tttttttttt ttttcttgcc ctgtttatca gaggttctct acaattaatt tcttaggcct
     2821 atttaagata catatttata tagttcttaa cggtttttct ctgatcattc cctgtcattt
     2881 ttagaatccc caggcctctc tctgagccag gacagtggca gggggagcct gaactttatg
     2941 aggagagggc agagccccct cttgcagacc ccctgccctt ccccatccca gccccggctc
     3001 ccagatgcag aggttgaagg tgggcagccc caggcccaca gtgaggtcag gaagtctgtt
     3061 gccttaatgt ccctttcccc caccaacata acccttctct gttccccagg tctattggca
     3121 agacttgtgg gtaggaacca gggaaggagg gttgttgggt ttttgtttcc ttgcctaccc
     3181 tctctttctg tcagcctttc ctacccccat tatgtcatga cctcatgtaa gtggaacact
     3241 attatcataa cccagaggtg cagcccagcc tgagtcacat aaaccctcta ctccctgttc
     3301 ttgatgaggg ctggtgctgg ggcccaggtg gagggaggga attagggatt caggctgtgg
     3361 ggaagccagg gtcccctatt ccaaactcct ctttccccct caacctatac cctcattggg
     3421 acattctcaa gcttttcaca cgaaaaggaa aaaaatgtta tttttagata cattttatga
     3481 ataacttttg ttatgaatat ggctggtaac cattgtgtat gttattaaag atacaaaatg
     3541 ttgggaaaaa aacaaaacca aaaaaaaaaa aaaaaaggaa aaaaggaaaa aaagaaagcc
     3601 ttccctgcac tatcagccca tccccccaga ccttgcccct gcctcctggg ctgtggacct
     3661 cccctgcttt gagcccaggg agggagaaga agccaggggg tagtgtggcc ctggggacct
     3721 gcctgtggtc cccaccacct ctcccagtgc cgggctgggc ggggtgtcag gtgtatttat
     3781 gtacctcttg cacactcatc aacctatgca agtccccacc ccggccctcc aggtttctgt
     3841 gcctttgctc attccccctc ttgactccta ggcttctccg gcccctccca ctaacagtgg
     3901 gaagtggggt gaaaggccac ctgtttggaa taagcagggt gtccctctca tgggaccctc
     3961 acctccacaa gccggtctag tcttgtcttg ttcacttccc atcagggtta ctgactctgc
     4021 ctggcactgg aaggtgatga gggatatcct ccccaagagg gaggtgagag cttcccaccc
     4081 acctgacagc agagtgcagg acgcaggcgg ccctactctg acaggcagga ccctgaccct
     4141 cccaccctcc atccccctct gtggtttcac cctaccctgc ccacttctgt ccccagcccc
     4201 actggcagaa tcagctttga gtaactgtac atttttctcg ctgttggaga agacttattt
     4261 gttggagttt caattgttaa tggtctgggc ttattttg
//
