LOCUS       NM_001401839            1344 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus SAC3 domain containing 1 (Sac3d1), mRNA.
ACCESSION   NM_001401839 XR_145790
VERSION     NM_001401839.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Nakajima,H., Tamura,T., Ito,M., Shibata,F., Kuroda,K., Fukuchi,Y.,
            Watanabe,N., Kitamura,T., Ikeda,Y. and Handa,M.
  TITLE     SHD1 is a novel cytokine-inducible, negative feedback regulator of
            STAT5-dependent transcription
  JOURNAL   Blood 113 (5), 1027-1036 (2009)
   PUBMED   18838617
REFERENCE   2  (bases 1 to 1344)
  AUTHORS   Khuda,S.E., Yoshida,M., Xing,Y., Shimasaki,T., Takeya,M.,
            Kuwahara,K. and Sakaguchi,N.
  TITLE     The Sac3 homologue shd1 is involved in mitotic progression in
            mammalian cells
  JOURNAL   J Biol Chem 279 (44), 46182-46190 (2004)
   PUBMED   15322101
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 28, 2022 this sequence version replaced XR_145790.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.7391.1,
                                           SRR26643284.1820.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840109, SAMN12840113
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on single protein-coding
                                                transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-753               JAXUCZ010000001.1  212845090-212845842 c
            754-1344            JAXUCZ010000001.1  212843463-212844053 c
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1344
                     /gene="Sac3d1"
                     /gene_synonym="RGD1308049"
                     /note="SAC3 domain containing 1"
                     /db_xref="GeneID:293690"
                     /db_xref="RGD:1308049"
     exon            1..753
                     /gene="Sac3d1"
                     /gene_synonym="RGD1308049"
                     /inference="alignment:Splign:2.1.0"
     CDS             180..1250
                     /gene="Sac3d1"
                     /gene_synonym="RGD1308049"
                     /codon_start=1
                     /product="SAC3 domain-containing protein 1"
                     /protein_id="NP_001388768.1"
                     /db_xref="GeneID:293690"
                     /db_xref="RGD:1308049"
                     /translation="MSDYKLPMGLCPDMCPAAERARRERERRLHRLEVEPGGCGNAPR
                     ADPRRTVKEYSRPAAGKPRPPPSLLRPPPVLLATVRYLAGEVADRTDVSCAEVASFVA
                     DRLRAVRLDLSLQGVDDAEAAAVLEPALATLLVVVARMRPEETRGVADPVLLQTQVQE
                     GFGSLRRCYARGKAPHPRQAAFQGLFLLYNLGSVEALQEVLQLPAALRACPPLQTALA
                     VDSAFREDNYARLFRLLRTLPYLQSCAVQEHIGYARRKALSRLSRALSTPRGQTLPLD
                     FIVHLLALDGLQEAQDLCQAHGLTLDKDRVIFLRGQYSEEGLPSPGTCHLLVGSKLQG
                     HTLEEVVMAEEEKDIHRPGSPT"
     exon            754..1344
                     /gene="Sac3d1"
                     /gene_synonym="RGD1308049"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggattatggg aggcgtttct aaaggccgcc ggagccgcaa atcgagaaaa ccgggtgaag
       61 aggggtgggc tagccagact ggatcccaag cctgttcccc gagcccacgg caggatgcag
      121 taccgcgctt ccgttggccc agcgatgctg agtgtgcatc ctctacccac agcccagcca
      181 tgtccgacta caaactgccc atgggcctgt gcccagacat gtgtccggct gcggagcgcg
      241 cccgacgcga acgcgagcgc cgcctgcacc gactggaggt tgagccaggc ggctgtggga
      301 atgctccccg agccgacccg aggcgcacag tgaaggagta cagccgtccg gcagcgggca
      361 aaccccggcc cccgccaagc ttgctgcggc cgcccccagt gctcctggcc accgtgcgct
      421 acttggcggg tgaggtggcc gaccgcaccg acgtgtcgtg cgcggaggtg gcgagcttcg
      481 tggccgaccg cctgcgggcg gtgcggttgg atctgtcgct gcagggcgtg gacgacgcgg
      541 aagcggcggc ggtgctggag cccgcgctgg ccacgctgct ggtcgtggtg gcgcggatgc
      601 ggcctgaaga gacgcgcgga gtggcggacc ctgtgctgct tcagactcaa gtgcaagaag
      661 gcttcggttc gctgcggcgc tgctacgcgc ggggcaaggc cccgcacccc cgccaggctg
      721 cctttcaggg cctctttctg ctctacaact tgggttccgt ggaagccctg caggaggttc
      781 tgcagctgcc tgccgccctg cgtgcctgcc caccccttca gactgccttg gctgttgact
      841 ctgccttccg tgaagacaac tatgcccgac tgtttcgtct gcttcggacc ctgccctacc
      901 tacagagctg cgcggtgcag gaacacattg gctatgcccg ccgaaaagcc ctgtcccgcc
      961 tgtcccgtgc cctgagcacg cccagaggac aaaccctgcc tttggacttc atagtacacc
     1021 ttctggccct ggatgggctc caggaagcgc aggacctgtg ccaggcccac ggactgacct
     1081 tggataaaga tagagttata ttcctgaggg gtcagtactc tgaggaagga ctcccatccc
     1141 ctggtacctg ccacttacta gtgggaagca agctgcaggg acacaccctg gaggaagtgg
     1201 tcatggcaga ggaagagaag gacattcaca gacctgggtc tcccacttga gcggtttcat
     1261 ttcccatgag acctggatcc gaacacctag ggctcttttt cacgactccc agacaataaa
     1321 aggaactcat tatgattttc aaac
//
