LOCUS       NM_001402101             556 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus serum amyloid A 3 (Saa3), mRNA.
ACCESSION   NM_001402101
VERSION     NM_001402101.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BF282318.1, SRR26360181.1769471.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN09345331,
                                           SAMN12840113 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-54                JAXUCZ010000001.1  106358377-106358430 c
            55-149              JAXUCZ010000001.1  106357786-106357880 c
            150-288             JAXUCZ010000001.1  106355609-106355747 c
            289-556             JAXUCZ010000001.1  106354986-106355253 c
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..556
                     /gene="Saa3"
                     /gene_synonym="Saal1"
                     /note="serum amyloid A 3"
                     /db_xref="GeneID:687992"
                     /db_xref="RGD:1594860"
     exon            1..54
                     /gene="Saa3"
                     /gene_synonym="Saal1"
                     /inference="alignment:Splign:2.1.0"
     exon            55..149
                     /gene="Saa3"
                     /gene_synonym="Saal1"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..427
                     /gene="Saa3"
                     /gene_synonym="Saal1"
                     /note="serum amyloid A-like 1"
                     /codon_start=1
                     /product="serum amyloid A-3 protein precursor"
                     /protein_id="NP_001389030.1"
                     /db_xref="GeneID:687992"
                     /db_xref="RGD:1594860"
                     /translation="MKSSIAIVFCLLILGVDSKRRFQFMKEAGQGTKDMWRAYSDMRK
                     ANWKNSDKYFHARGNYDAARRGPGGAWAAKVISDAREGIQRLIGHGAEDSRADQFANK
                     WGRSGKDPNHFRPAGLPRKY"
     exon            150..288
                     /gene="Saa3"
                     /gene_synonym="Saal1"
                     /inference="alignment:Splign:2.1.0"
     exon            289..556
                     /gene="Saa3"
                     /gene_synonym="Saal1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgcaagggac agaggccact cacctggggt cccagcagga gttcacagca caagcaggat
       61 gaagtcttcc attgccatcg ttttttgcct cttgatcctg ggagttgaca gcaaaagacg
      121 gttccagttt atgaaggaag ctgggcaagg gaccaaagac atgtggcgcg cctactcgga
      181 catgagaaag gccaactgga aaaactcaga caaatacttc catgctcggg ggaactatga
      241 tgccgcccga aggggtcctg ggggagcctg ggctgctaaa gtcatcagtg atgccagaga
      301 gggtattcag agattaatag gacacggagc agaggactca agagctgacc agtttgccaa
      361 caagtggggc cggagtggca aagaccccaa ccactttcga cctgctggtc tgcccaggaa
      421 atactgagtt ttctcttcat gttgttcccg ggcgcgcagc cccccaagga aaggggcaat
      481 tactgagttg agttatttcc taaaacctgg atccctaaac atcccaatgt gctgaataaa
      541 tgcttgtgaa atgcaa
//
