LOCUS       NM_001191701            1634 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus S100 calcium binding protein Z (S100z), mRNA.
ACCESSION   NM_001191701 XM_039101915 XM_226710
VERSION     NM_001191701.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Gribenko,A.V., Hopper,J.E. and Makhatadze,G.I.
  TITLE     Molecular characterization and tissue distribution of a novel
            member of the S100 family of EF-hand proteins
  JOURNAL   Biochemistry 40 (51), 15538-15548 (2001)
   PUBMED   11747429
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000002.1.
            
            On or before Oct 4, 2022 this sequence version replaced
            XM_039101915.1, NM_001191701.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.2612698.1,
                                           SRR26360181.44267.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-247               JAXUCZ010000002.1  28476504-28476750   c
            248-327             JAXUCZ010000002.1  28475470-28475549   c
            328-491             JAXUCZ010000002.1  28474995-28475158   c
            492-1634            JAXUCZ010000002.1  28472527-28473669   c
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q12"
     gene            1..1634
                     /gene="S100z"
                     /gene_synonym="RGD1562902"
                     /note="S100 calcium binding protein Z"
                     /db_xref="GeneID:294661"
                     /db_xref="RGD:1562902"
     exon            1..247
                     /gene="S100z"
                     /gene_synonym="RGD1562902"
                     /inference="alignment:Splign:2.1.0"
     exon            248..327
                     /gene="S100z"
                     /gene_synonym="RGD1562902"
                     /inference="alignment:Splign:2.1.0"
     exon            328..491
                     /gene="S100z"
                     /gene_synonym="RGD1562902"
                     /inference="alignment:Splign:2.1.0"
     CDS             351..650
                     /gene="S100z"
                     /gene_synonym="RGD1562902"
                     /note="S100 calcium binding protein, zeta"
                     /codon_start=1
                     /product="protein S100-Z"
                     /protein_id="NP_001178630.1"
                     /db_xref="GeneID:294661"
                     /db_xref="RGD:1562902"
                     /translation="MPTQLEMAMETMIRIFHRYSCKEGDRFKLNKGELKMLLQRELTE
                     FLTCQKDPQLVDKIMQDLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK"
     exon            492..1634
                     /gene="S100z"
                     /gene_synonym="RGD1562902"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caaaaagagg tccaggcgga ggatacaggt catcctgacg ttagcagaca tctggggtaa
       61 agattcaaag atgatagaag tgtccaagag tactccagga gcaatatttc agagctggac
      121 tgtaagacag cattcaaagc tgagggaaca tggccacaaa gccttgggga cagtctcagc
      181 aagaggacgg aacctaaaag aagatgccag tgttcttcac atctaacaca gtccaggaaa
      241 aataacgggg tgtcaggtgg aaacccagag atccgtgctc agagggtaac cgtgaacacc
      301 tgtagacagc cgcatcccgc cgaacaggag tcgcccactc cactgccagc atgcccaccc
      361 agctggagat ggctatggag acgatgatcc gcatcttcca ccgttactct tgcaaggagg
      421 gggacaggtt caagctcaac aagggggagc tgaagatgct cttacagcga gagctcacag
      481 aattcctcac atgtcaaaag gacccccagt tggtggataa gataatgcag gacctggacg
      541 ctaacaagga caacgaagtg gattttaatg agtttgtggt catggtggca gctctgacgg
      601 tcgcttgtaa cgattacttt gtggagcaac tgaagaagaa aggcaaataa aaaaaaatgg
      661 ctagcaagct aacaagaggc agaaacagag ccaaatctgc acctcccgtg ggtctatatc
      721 cttaccatgg ataggcacag tgatatgact tctatatgct atatatgtgt acttattagc
      781 aataagttat gttaaccttg acatgctgac ttcacacaat tatttattcc aggccttagg
      841 ccctcttgaa gattttccca cattattaaa aatgttacta tgatttattt gtcaaacaga
      901 gagcagccac acatttagcc acttttgaaa ggagacttga gtttggtgga tttttaagat
      961 ctcattctta agttgtgttt tgctatttct tccttactga agagattgca aggctctccc
     1021 cataggctct tttttttttt ggttcttttt ttcggagctg gggaccgaac ccagggcctt
     1081 gcgcttccta ggtaagcgct ctaccactga gctaaatccc cagcccctcc ccataggctc
     1141 ttaattgtgc ttcaaatggc agaagctatg aggggacttc ctgcagaaag gctggtaaag
     1201 agaaggtcga gccctgcagt ttggcacatg cctttaatcc cagcgcttgg gaggcagagg
     1261 caggcggatc tctgtgagct ggaagccagt ctggtctaca aaatgagttc caggacagcc
     1321 aggcctacgc agagaaaccc tgtctcagga gggggtgtgt gcttttctca gtgaaataga
     1381 atgagatggg cagagtcagg cctccaggtt caaactataa gagctgaata gagcgagtct
     1441 tgggacttag ttggaaatac cgcccacgcc cccaggactg actgttttat tctggatacc
     1501 aggtcccaga gcttcccctc gggctatacg gcatcgagcc ccggggatac ttgcttcctt
     1561 ccctccatcc ttcctggtct ttctccagtg ctccaacttg tttgctgcgt ctaaaataaa
     1621 tgacttgtac aaaa
//
