LOCUS       NM_001134628            2954 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus S100P binding protein (S100pbp), mRNA.
ACCESSION   NM_001134628 XM_001060653 XM_575913
VERSION     NM_001134628.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2954)
  AUTHORS   Dowen,S.E., Crnogorac-Jurcevic,T., Gangeswaran,R., Hansen,M.,
            Eloranta,J.J., Bhakta,V., Brentnall,T.A., Luttges,J., Kloppel,G.
            and Lemoine,N.R.
  TITLE     Expression of S100P and its novel binding partner S100PBPR in early
            pancreatic cancer
  JOURNAL   Am J Pathol 166 (1), 81-92 (2005)
   PUBMED   15632002
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Sep 4, 2008 this sequence version replaced
            XM_001060653.1, XM_575913.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2954
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2954
                     /gene="S100pbp"
                     /gene_synonym="RGD1564943"
                     /note="S100P binding protein"
                     /db_xref="GeneID:500551"
                     /db_xref="RGD:1564943"
     exon            1..120
                     /gene="S100pbp"
                     /gene_synonym="RGD1564943"
                     /inference="alignment:Splign:2.1.0"
     exon            121..237
                     /gene="S100pbp"
                     /gene_synonym="RGD1564943"
                     /inference="alignment:Splign:2.1.0"
     exon            238..1028
                     /gene="S100pbp"
                     /gene_synonym="RGD1564943"
                     /inference="alignment:Splign:2.1.0"
     CDS             240..1430
                     /gene="S100pbp"
                     /gene_synonym="RGD1564943"
                     /codon_start=1
                     /product="S100P-binding protein"
                     /protein_id="NP_001128100.1"
                     /db_xref="GeneID:500551"
                     /db_xref="RGD:1564943"
                     /translation="MTCSLLPSEQSSGTSFLPKDNASFSWGSSDEDELDDSLLEFSDG
                     EEDDGHFSFTEEEIEMLLKDDDGGHNEYRARKSQILPHTPQENSLYSLGPAAETPGFL
                     KLPQLSPSVGHGPTPSKSLNRHFVLEKNLIKVTVVAPFNPTVCDPVLDKDKIDSSKET
                     EKPASLQEQTREDDLHPNESKRCTEPEGVSPNNSAWDGPLLSSPSNNNIEQTASDKNI
                     PESKKPTPVFSQISNHSEVPNRKNSGSHKSGCEVRIPVVSSSSNRHAFDKDSGEAKGE
                     RRLGKVIPVLQTRTRMFSQSDLEKQKDIYLSKVIAHIEDPGDSNQGALGELDALMDQV
                     HMQNPDWQHPSDLTTRNYARFRQRPLQRYSLSQWVDRNKRSHHRFQRLPDFSYSPYVS
                     PHPQ"
     exon            1029..1111
                     /gene="S100pbp"
                     /gene_synonym="RGD1564943"
                     /inference="alignment:Splign:2.1.0"
     exon            1112..1203
                     /gene="S100pbp"
                     /gene_synonym="RGD1564943"
                     /inference="alignment:Splign:2.1.0"
     exon            1204..1288
                     /gene="S100pbp"
                     /gene_synonym="RGD1564943"
                     /inference="alignment:Splign:2.1.0"
     exon            1289..2954
                     /gene="S100pbp"
                     /gene_synonym="RGD1564943"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgtctaggct aggggtcggg ggcgcctgtt gcttcttcac agggccgcgt acgtcgtctt
       61 cccccgtgag gagcagggaa gctcgtctcg ctgagggaag ggctgattct ccctcctgag
      121 gaaggtggga gtcaatcact ttgacaagtc tcctgaaagg aacagccagc aggagttgaa
      181 acctttttcc atttggtctc gtggcaaagg cagagattgc tccagcagct ccacacaata
      241 tgacgtgctc actattaccc tctgaacagt cttctggtac ctcttttctg cctaaagaca
      301 atgcctcatt ttcttggggt tcctcggatg aagatgagtt ggatgactcc ttgttggagt
      361 tttctgacgg agaagaagat gatggccatt tcagtttcac agaagaagag attgagatgc
      421 tcttgaagga cgatgatggt gggcataatg agtatagagc gagaaagagt caaattctac
      481 cccatactcc tcaagaaaat tctttgtaca gcttgggacc agcagctgaa acccctggct
      541 tcctcaaact acctcaacta agtccatcag ttggtcatgg gccaactcct agtaaatcat
      601 taaacagaca ctttgtactt gaaaagaatc ttataaaagt aactgttgtt gcaccattta
      661 atccaacagt ttgtgatcct gtgcttgata aagacaagat cgattcctcc aaagaaacgg
      721 aaaaacctgc ctcccttcag gaacagacga gagaagacga tcttcatcct aatgagagta
      781 aacgttgcac tgaacctgaa ggggtcagtc ccaataactc tgcttgggat gggcccctgc
      841 tttcttctcc ttcaaataat aacatcgaac aaactgcctc agataaaaat atacctgaaa
      901 gtaagaaacc tacccctgtg ttctctcaga tctccaacca ttcagaagta cccaacagga
      961 aaaatagtgg atcacacaaa tcaggttgtg aagtgagaat tccagttgtg tccagttcat
     1021 caaacagaca tgcctttgac aaggattctg gggaggcgaa aggtgagaga agactaggca
     1081 aagtcatccc tgtgctacaa accaggacta ggatgttttc acaatcagat ctagaaaaac
     1141 agaaggacat ttatctcagc aaagtcattg ctcatataga agacccaggg gactctaacc
     1201 aaggtgcctt gggagagctc gatgctctga tggatcaagt tcatatgcag aacccagact
     1261 ggcagcatcc ttcagatctt accacacgaa attatgcccg gttccgacag cgacctctgc
     1321 agagatacag tctgagtcag tgggttgaca gaaacaagcg gagccaccac cgtttccagc
     1381 gcctcccaga cttctcatac agtccctatg tttcacccca tccacagtga ccgccccacc
     1441 caggactctc cacagcagca ccgtactcct ctgccatttg tgtttgtata ttttgagttt
     1501 tatttttcac aagattttta tttaaagaat ttgtcaactt ttggaagtgc ccattactgt
     1561 cttgaatttt tttttttttt taaatgaggg ccacctccgc atccctggtt tgtgtccgtc
     1621 tgttgtacat gttcagcaat gttaagcagt gtttttctgt ttgttctttg ttgttgctgc
     1681 tgctgtttta aaatttaaaa tgaaagtgat tcccttctga aggcctgtga caagtcagaa
     1741 cagctgtaag cacaggcagt cttgttcaac cggaacgaag tatctttccg tctgctgtga
     1801 ggaggaggtt gttgtgcagg ctaagggccg gtgttagtat tgttgacttg tgaatagata
     1861 gaggtcactt ttaacagccc ctctttttaa atctgagttt cttgaatact tgtcagtatt
     1921 ttaatgttgc caattcagta catttgaaat aggatagagc tgtggttgtg cttccgcggt
     1981 gcggggctct tctgctggcc tctgagccag aaatttaaaa aaaaaaaaaa gagaaatagt
     2041 atagagaggg agaaaagtcc tgttgcaagg atagattaaa aatgtaaatc ctctcctttc
     2101 tgtacctatt agctgccttt aaaaaaatta ttattaatgg ctcctttcac tctctgttaa
     2161 atatcttttg ttcataatgt ttgaaatctt atacatctta actgacagaa gacagctgac
     2221 taatccttgt ggttctccgt ggtcttgtga ctggttgatc tctgcccctt ttcagagtta
     2281 agaggcgcct agggatcttt gatttcttct gccccaagtt catgtgttgc tgctaatcaa
     2341 gggacctttt cctatgaaat ccttcgggag tcacgcttgc ctctcctgtt ggtacaggta
     2401 ccctttatac cctgcgtgtt agttagtgtt gtggcttttg gtcccttgtt tcacattagt
     2461 accggagcag ctgggcaaag tatgattgag ccctgcacca caacctcacc tactctagag
     2521 taaggggtgg tgttccagcc aacgctgaca ggctctgtgt actgtcttaa tggatgtctt
     2581 agaagatctg tacttcttac aggcagctct agacgacatt ctgagagggt tgactgtatg
     2641 acattgctgc tgcggccgtc actctgaagt gactcagagt agcctagcct ctgtctgctt
     2701 ttctttctgt agtcccatct tatatgtggc taacccaccc taagtagtct actccacttc
     2761 agaaaagtga tctttttgtt ctgttttgtt tttatttttc aagatagggt ttctttgtat
     2821 actcctggct gccctggaac tcattctgta gaccatgctg gtcttaactc acagagatct
     2881 gcctgccttg ccttccgact actgggatta aaggcgtgga tcaccactct ttggctaaat
     2941 aagtgaccgt gatt
//
