LOCUS       NM_012521                405 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus S100 calcium binding protein G (S100g), mRNA.
ACCESSION   NM_012521
VERSION     NM_012521.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Varshney,S., Adela,R., Kachhawa,G., Dada,R., Kulshreshtha,V.,
            Kumari,R., Agarwal,R. and Khadgawat,R.
  TITLE     Disrupted placental vitamin D metabolism and calcium signaling in
            gestational diabetes and pre-eclampsia patients
  JOURNAL   Endocrine 80 (1), 191-200 (2023)
   PUBMED   36477942
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Wang,W., Knosp,E., Tai,G., Zhao,Y., Liang,Q. and Guo,Y.
  TITLE     Differential effects of estrogen and estrogen receptor antagonist,
            ICI 182 780, on the expression of calbindin-D9k in rat pituitary
            prolactinoma GH cells
  JOURNAL   Int J Clin Exp Pathol 7 (12), 8498-8505 (2014)
   PUBMED   25674214
  REMARK    GeneRIF: Estrogen-induced CaBP-9k directly combines with ERalpha,
            suggesting that CaBP-9k is involved in the biological effects
            mediated by an ER pathway in the GH3 rat pituitary prolactinoma
            cell line
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 405)
  AUTHORS   Ahn,H.J., An,B.S., Jung,E.M., Yang,H., Choi,K.C. and Jeung,E.B.
  TITLE     Parabens inhibit the early phase of folliculogenesis and
            steroidogenesis in the ovaries of neonatal rats
  JOURNAL   Mol Reprod Dev 79 (9), 626-636 (2012)
   PUBMED   22777679
REFERENCE   4  (bases 1 to 405)
  AUTHORS   Rios,M., Parada-Bustamante,A., Velasquez,L.A., Croxatto,H.B. and
            Orihuela,P.A.
  TITLE     Participation of the oviductal s100 calcium binding protein G in
            the genomic effect of estradiol that accelerates oviductal embryo
            transport in mated rats
  JOURNAL   Reprod Biol Endocrinol 9, 69 (2011)
   PUBMED   21605449
  REMARK    GeneRIF: S100 g is a functional component of E2 genomic effect that
            accelerates egg transport.
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 405)
  AUTHORS   Schwaller,B.
  TITLE     Cytosolic Ca2+ buffers
  JOURNAL   Cold Spring Harb Perspect Biol 2 (11), a004051 (2010)
   PUBMED   20943758
  REMARK    Review article
REFERENCE   6  (bases 1 to 405)
  AUTHORS   Krisinger,J., Darwish,H., Maeda,N. and DeLuca,H.F.
  TITLE     Structure and nucleotide sequence of the rat intestinal vitamin
            D-dependent calcium binding protein gene
  JOURNAL   Proc Natl Acad Sci U S A 85 (23), 8988-8992 (1988)
   PUBMED   3194402
REFERENCE   7  (bases 1 to 405)
  AUTHORS   Perret,C., Lomri,N., Gouhier,N., Auffray,C. and Thomasset,M.
  TITLE     The rat vitamin-D-dependent calcium-binding protein (9-kDa CaBP)
            gene. Complete nucleotide sequence and structural organization
  JOURNAL   Eur J Biochem 172 (1), 43-51 (1988)
   PUBMED   3345761
REFERENCE   8  (bases 1 to 405)
  AUTHORS   Darwish,H.M., Krisinger,J., Strom,M. and DeLuca,H.F.
  TITLE     Molecular cloning of the cDNA and chromosomal gene for vitamin
            D-dependent calcium-binding protein of rat intestine
  JOURNAL   Proc Natl Acad Sci U S A 84 (17), 6108-6111 (1987)
   PUBMED   3476932
REFERENCE   9  (bases 1 to 405)
  AUTHORS   MacManus,J.P., Watson,D.C. and Yaguchi,M.
  TITLE     The purification and complete amino acid sequence of the 9000-Mr
            Ca2+-binding protein from rat placenta. Identity with the vitamin
            D-dependent intestinal Ca2+-binding protein
  JOURNAL   Biochem J 235 (2), 585-595 (1986)
   PUBMED   3741407
REFERENCE   10 (bases 1 to 405)
  AUTHORS   Desplan,C., Heidmann,O., Lillie,J.W., Auffray,C. and Thomasset,M.
  TITLE     Sequence of rat intestinal vitamin D-dependent calcium-binding
            protein derived from a cDNA clone. Evolutionary implications
  JOURNAL   J Biol Chem 258 (22), 13502-13505 (1983)
   PUBMED   6315698
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from J02954.1.
            
            On Aug 30, 2012 this sequence version replaced NM_012521.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: J02954.1, BC059153.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132298, SAMN06680422
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-405               J02954.1           2-406
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq14"
     gene            1..405
                     /gene="S100g"
                     /gene_synonym="Cabp; Calb3; Cbpi; Rncalbd9"
                     /note="S100 calcium binding protein G"
                     /db_xref="GeneID:24249"
                     /db_xref="RGD:2253"
     exon            1..52
                     /gene="S100g"
                     /gene_synonym="Cabp; Calb3; Cbpi; Rncalbd9"
                     /inference="alignment:Splign:2.1.0"
     exon            53..196
                     /gene="S100g"
                     /gene_synonym="Cabp; Calb3; Cbpi; Rncalbd9"
                     /inference="alignment:Splign:2.1.0"
     CDS             62..301
                     /gene="S100g"
                     /gene_synonym="Cabp; Calb3; Cbpi; Rncalbd9"
                     /note="calcium-binding protein, intestinal, vitamin
                     D-dependent (9-kDa CaBP); 9 kDa CaBP; cholecalcin; vitamin
                     D-dependent calcium-binding protein, intestinal;
                     calbindin-D9K; calbindin 3, (vitamin D-dependent calcium
                     binding protein)"
                     /codon_start=1
                     /product="protein S100-G"
                     /protein_id="NP_036653.1"
                     /db_xref="GeneID:24249"
                     /db_xref="RGD:2253"
                     /translation="MSAKKSPEEMKSIFQKYAAKEGDPNQLSKEELKLLIQSEFPSLL
                     KASSTLDNLFKELDKNGDGEVSYEEFEVFFKKLSQ"
     exon            197..405
                     /gene="S100g"
                     /gene_synonym="Cabp; Calb3; Cbpi; Rncalbd9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agacctcacc tgttcctgtc tgactctggc agcactcact gacagcaagc agcacagaaa
       61 aatgagcgct aagaaatctc ccgaagaaat gaagagcatt tttcaaaaat atgcagccaa
      121 agaaggcgat ccaaaccagc tgtccaagga ggagctgaag ctgctgattc agtcagagtt
      181 ccccagcctc ctgaaggctt caagtactct agacaatctc tttaaagagc tggataagaa
      241 cggtgatgga gaagttagct atgaagaatt cgaagttttc ttcaaaaagt tatcacaatg
      301 aagccagaag aaggagctcc gacaccacct actgattgaa tcctatccaa tcccaaagat
      361 ctagctgtga gagcaagata ctgttaataa agcaaattct gagac
//
