LOCUS       NM_001106438             445 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus S100 calcium binding protein A5 (S100a5), mRNA.
ACCESSION   NM_001106438 XM_001075383 XM_215608
VERSION     NM_001106438.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Tadenev,A.L., Kulaga,H.M., May-Simera,H.L., Kelley,M.W.,
            Katsanis,N. and Reed,R.R.
  TITLE     Loss of Bardet-Biedl syndrome protein-8 (BBS8) perturbs olfactory
            function, protein localization, and axon targeting
  JOURNAL   Proc Natl Acad Sci U S A 108 (25), 10320-10325 (2011)
   PUBMED   21646512
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Bertini,I., Das Gupta,S., Hu,X., Karavelas,T., Luchinat,C.,
            Parigi,G. and Yuan,J.
  TITLE     Solution structure and dynamics of S100A5 in the apo and Ca2+-bound
            states
  JOURNAL   J Biol Inorg Chem 14 (7), 1097-1107 (2009)
   PUBMED   19536568
REFERENCE   3  (bases 1 to 445)
  AUTHORS   Hsieh,H.L., Schafer,B.W., Cox,J.A. and Heizmann,C.W.
  TITLE     S100A13 and S100A6 exhibit distinct translocation pathways in
            endothelial cells
  JOURNAL   J Cell Sci 115 (Pt 15), 3149-3158 (2002)
   PUBMED   12118070
REFERENCE   4  (bases 1 to 445)
  AUTHORS   Schafer,B.W., Fritschy,J.M., Murmann,P., Troxler,H., Durussel,I.,
            Heizmann,C.W. and Cox,J.A.
  TITLE     Brain S100A5 is a novel calcium-, zinc-, and copper ion-binding
            protein of the EF-hand superfamily
  JOURNAL   J Biol Chem 275 (39), 30623-30630 (2000)
   PUBMED   10882717
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473976.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_215608.3, XM_001075383.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: BF548433.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMD00132261, SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..445
                     /gene="S100a5"
                     /note="S100 calcium binding protein A5"
                     /db_xref="GeneID:295211"
                     /db_xref="RGD:1308996"
     exon            1..170
                     /gene="S100a5"
                     /inference="alignment:Splign:2.1.0"
     CDS             33..314
                     /gene="S100a5"
                     /codon_start=1
                     /product="protein S100-A5"
                     /protein_id="NP_001099908.1"
                     /db_xref="GeneID:295211"
                     /db_xref="RGD:1308996"
                     /translation="METPLEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKTELSL
                     AEKMKESSIDNLMKSLDKNSDQEIDFKEYSVFLTTLCMAYNDFFLEDNK"
     exon            171..445
                     /gene="S100a5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcctctctc ttccttcaga gtacacatca ttatggagac tcctcttgag aaggcactga
       61 ccaccatggt caccactttc cataaatatt cagggagaga gggtagcaag ttgaccctga
      121 gtaggaaaga actgaaggag ctgatcaaga cagaactgag tcttgcagag aagatgaagg
      181 agagcagcat tgataacttg atgaagagcc tggacaaaaa cagcgaccag gagattgact
      241 tcaaggagta ctctgtgttc ctgaccacgc tgtgcatggc ctacaatgac ttcttcttag
      301 aggacaacaa gtgaccagct accctcacca gcagcccctt gtcctgacct ctgcagcctc
      361 tttaactgct cctcctaggc cccctgccct tctctttctt ccagatggat tcttccagca
      421 gagaaataaa gccttatcca cagca
//
