LOCUS       NM_001271312            1084 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus S100 calcium binding protein A14 (S100a14), mRNA.
ACCESSION   NM_001271312 XM_002725995
VERSION     NM_001271312.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Gonzalez-Begne,M., Lu,B., Han,X., Hagen,F.K., Hand,A.R.,
            Melvin,J.E. and Yates,J.R.
  TITLE     Proteomic analysis of human parotid gland exosomes by
            multidimensional protein identification technology (MudPIT)
  JOURNAL   J Proteome Res 8 (3), 1304-1314 (2009)
   PUBMED   19199708
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   3  (bases 1 to 1084)
  AUTHORS   Wolf,R., Howard,O.M., Dong,H.F., Voscopoulos,C., Boeshans,K.,
            Winston,J., Divi,R., Gunsior,M., Goldsmith,P., Ahvazi,B.,
            Chavakis,T., Oppenheim,J.J. and Yuspa,S.H.
  TITLE     Chemotactic activity of S100A7 (Psoriasin) is mediated by the
            receptor for advanced glycation end products and potentiates
            inflammation with highly homologous but functionally distinct
            S100A15
  JOURNAL   J Immunol 181 (2), 1499-1506 (2008)
   PUBMED   18606705
REFERENCE   4  (bases 1 to 1084)
  AUTHORS   Buchau,A.S., Hassan,M., Kukova,G., Lewerenz,V., Kellermann,S.,
            Wurthner,J.U., Wolf,R., Walz,M., Gallo,R.L. and Ruzicka,T.
  TITLE     S100A15, an antimicrobial protein of the skin: regulation by E.
            coli through Toll-like receptor 4
  JOURNAL   J Invest Dermatol 127 (11), 2596-2604 (2007)
   PUBMED   17625598
REFERENCE   5  (bases 1 to 1084)
  AUTHORS   Pietas,A., Schluns,K., Marenholz,I., Schafer,B.W., Heizmann,C.W.
            and Petersen,I.
  TITLE     Molecular cloning and characterization of the human S100A14 gene
            encoding a novel member of the S100 family
  JOURNAL   Genomics 79 (4), 513-522 (2002)
   PUBMED   11944983
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001271312.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the genome
            assembly. The genomic coordinates used for the transcript record
            were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582419.3015001.1,
                                           SRR22582416.602304.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMN06680437
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-51                JAXUCZ010000002.1  178305976-178306026
            52-169              JAXUCZ010000002.1  178306354-178306471
            170-316             JAXUCZ010000002.1  178306886-178307032
            317-1084            JAXUCZ010000002.1  178307237-178308004
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1084
                     /gene="S100a14"
                     /note="S100 calcium binding protein A14"
                     /db_xref="GeneID:685385"
                     /db_xref="RGD:1595063"
     exon            1..51
                     /gene="S100a14"
                     /inference="alignment:Splign:2.1.0"
     exon            52..169
                     /gene="S100a14"
                     /inference="alignment:Splign:2.1.0"
     CDS             140..454
                     /gene="S100a14"
                     /codon_start=1
                     /product="protein S100-A14"
                     /protein_id="NP_001258241.1"
                     /db_xref="GeneID:685385"
                     /db_xref="RGD:1595063"
                     /translation="MGQCRSANAEDAQELSDVERAIETLIKNFHNYSVEGKKETLTPA
                     ELRDLVTQQLPHLMPSNCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVKMERPVA
                     RS"
     exon            170..316
                     /gene="S100a14"
                     /inference="alignment:Splign:2.1.0"
     exon            317..1084
                     /gene="S100a14"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgagctca ggtgagccag ctcctccatc ctgtctccca gctgccagca ggcagatcat
       61 gatccaacag ctcctgtggg gcaggctata ggacagacga caaaactcaa ctcacagaag
      121 aaccagtgta ccaggaacaa tgggacagtg tcggtcagcc aatgctgagg atgcccaaga
      181 actcagtgat gtagagaggg ccattgagac cctcatcaag aacttccata actactctgt
      241 ggagggtaaa aaggaaacac tgacccctgc tgaacttcga gacctggtta cccagcagtt
      301 gccgcacctc atgccgagca actgtgggct agaagagaaa attgccaacc tgggaaactg
      361 taatgactcg aaactggagt ttggaagctt ctgggagttg attggcgaag cggccaaaag
      421 tgtgaagatg gagaggcctg ttgctcggag ctgagaacct ctacttggaa cttattgggg
      481 gtgttggggg taagggattt tagaggccct ggaaataaaa cttctctcaa cctccaccac
      541 ccctttcccc agcatgcatc tctcctcatc tctgcaaagt tcaggttcag gacaggcttc
      601 cctgtgggct ctgtggagct cctgggtcca gaagtcctta tgtcaagggc actcaggggg
      661 tgggttgggg ctggagagga tatgcaggga tcctggaagg gtaagggcca agcaatttgg
      721 tagtggggga agggcagaaa ggaactgggc tatgggaagt gatccaaaga gtggggctgg
      781 gaaatctggc tgcatatttg gtcctgaaaa gggtgtctga gaacctaccc ccttctaatc
      841 ttgtccaacc taaagtgtag ttgtctgccc tgagctatcc atgctacttc cagctctgcc
      901 ccatcctcct tccagggtct gtccctgagt aggggcaggg gaaataggag cagagttgca
      961 aaagaggctg aggagggcat gactttatga ctttggggtg agaggaccag ctagatgctt
     1021 gagcatttat ggatgatagt tattttatat catttgatta ataaaaatat tggaaaatgt
     1081 aaaa
//
