LOCUS       NM_001399600            4376 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus RING1 and YY1 binding protein (Rybp), mRNA.
ACCESSION   NM_001399600
VERSION     NM_001399600.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4376)
  AUTHORS   Ma,W., Zhang,X., Li,M., Ma,X., Huang,B., Chen,H. and Chen,D.
  TITLE     Proapoptotic RYBP interacts with FANK1 and induces tumor cell
            apoptosis through the AP-1 signaling pathway
  JOURNAL   Cell Signal 28 (8), 779-787 (2016)
   PUBMED   27060496
REFERENCE   2  (bases 1 to 4376)
  AUTHORS   Qin,J., Whyte,W.A., Anderssen,E., Apostolou,E., Chen,H.H.,
            Akbarian,S., Bronson,R.T., Hochedlinger,K., Ramaswamy,S.,
            Young,R.A. and Hock,H.
  TITLE     The polycomb group protein L3mbtl2 assembles an atypical
            PRC1-family complex that is essential in pluripotent stem cells and
            early development
  JOURNAL   Cell Stem Cell 11 (3), 319-332 (2012)
   PUBMED   22770845
REFERENCE   3  (bases 1 to 4376)
  AUTHORS   Gearhart,M.D., Corcoran,C.M., Wamstad,J.A. and Bardwell,V.J.
  TITLE     Polycomb group and SCF ubiquitin ligases are found in a novel BCOR
            complex that is recruited to BCL6 targets
  JOURNAL   Mol Cell Biol 26 (18), 6880-6889 (2006)
   PUBMED   16943429
REFERENCE   4  (bases 1 to 4376)
  AUTHORS   Giangrande,P.H., Zhu,W., Schlisio,S., Sun,X., Mori,S., Gaubatz,S.
            and Nevins,J.R.
  TITLE     A role for E2F6 in distinguishing G1/S- and G2/M-specific
            transcription
  JOURNAL   Genes Dev 18 (23), 2941-2951 (2004)
   PUBMED   15574595
REFERENCE   5  (bases 1 to 4376)
  AUTHORS   Ebling,F.J., Brooks,A.N., Cronin,A.S., Ford,H. and Kerr,J.B.
  TITLE     Estrogenic induction of spermatogenesis in the hypogonadal mouse
  JOURNAL   Endocrinology 141 (8), 2861-2869 (2000)
   PUBMED   10919273
REFERENCE   6  (bases 1 to 4376)
  AUTHORS   Garcia,E., Marcos-Gutierrez,C., del Mar Lorente,M., Moreno,J.C. and
            Vidal,M.
  TITLE     RYBP, a new repressor protein that interacts with components of the
            mammalian Polycomb complex, and with the transcription factor YY1
  JOURNAL   EMBO J 18 (12), 3404-3418 (1999)
   PUBMED   10369680
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.17383.1,
                                           SRR26360194.1352860.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760393 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-113               JAXUCZ010000004.1  134484620-134484732 c
            114-239             JAXUCZ010000004.1  134483855-134483980 c
            240-416             JAXUCZ010000004.1  134437044-134437220 c
            417-515             JAXUCZ010000004.1  134436834-134436932 c
            516-4376            JAXUCZ010000004.1  134432663-134436523 c
FEATURES             Location/Qualifiers
     source          1..4376
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..4376
                     /gene="Rybp"
                     /note="RING1 and YY1 binding protein"
                     /db_xref="GeneID:312603"
                     /db_xref="RGD:1307077"
     exon            1..113
                     /gene="Rybp"
                     /inference="alignment:Splign:2.1.0"
     CDS             82..768
                     /gene="Rybp"
                     /codon_start=1
                     /product="RING1 and YY1-binding protein"
                     /protein_id="NP_001386529.1"
                     /db_xref="GeneID:312603"
                     /db_xref="RGD:1307077"
                     /translation="MTMGDKKSPTRPKRQAKPAADEGFWDCSVCTFRNSAEAFKCSIC
                     DVRKGTSTRKPRINSQLVAQQVAQQYATPPPPKKEKKEKVEKPDKEKPEKDKDISPSV
                     TKKNTNKKTKPKSDILKDPPSEANSIQSANATTKTSETNHTSRPRLKNVDRSTAQQLA
                     VTVGNVTVIITDFKEKTRSSSTSSSTVTSSAGSEQQNQSSSGSESTDKGSSRSSTPKG
                     DMSAVNDESF"
     exon            114..239
                     /gene="Rybp"
                     /inference="alignment:Splign:2.1.0"
     exon            240..416
                     /gene="Rybp"
                     /inference="alignment:Splign:2.1.0"
     exon            417..515
                     /gene="Rybp"
                     /inference="alignment:Splign:2.1.0"
     exon            516..4376
                     /gene="Rybp"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgctccgcg acgctgcgga ccgcgcttct cctctgagcg gaggcgcgcg cagctgtggg
       61 gcgccggggg ccagcccgtc catgaccatg ggcgacaaga agagcccgac caggccaaaa
      121 agacaagcga aaccggctgc agacgaaggc ttttgggatt gtagcgtctg cacctttagg
      181 aacagcgccg aagcctttaa atgcagcatc tgcgatgtgc ggaaaggcac ctccaccagg
      241 aaacctcgca tcaattctca gctggtggca cagcaggtgg cacagcagta tgccactcca
      301 cctcccccta agaaggagaa gaaggagaag gttgaaaagc ctgacaaaga aaagccagag
      361 aaagacaagg acattagccc cagtgtcacc aagaaaaaca ccaacaagaa aacaaaacca
      421 aagtctgata ttctgaaaga tcctcctagt gaagctaaca gcatacagtc tgctaatgcc
      481 acaacaaaga ccagcgaaac gaaccacacc tcaaggcccc ggctgaagaa tgtggacagg
      541 agcactgcac agcagttggc agtaactgtg ggcaacgtca ccgtcattat cacagacttt
      601 aaggaaaaga ctcgctcctc ctctacatcc tcctccacag tgacctccag tgcagggtca
      661 gaacagcaga accagagcag ctcgggctca gagagtacag acaaaggctc ctcccgctcc
      721 tccacgccaa agggcgacat gtcagcagta aatgatgaat ctttctgaaa ttgcacacgg
      781 aattgtgaaa ctatgaatca gggtatgaga ttcaaaccgt ccacctgccc atgctgcttg
      841 caccctggag agtcttctgt ggacgacctt gtagtgatgc taccaggaga ggttctgctt
      901 gcgtgggcat ctggctacca aggaacttcg taccctgaca gttactcttg acacttttat
      961 gtattccatt gttttatatg attttcctaa caatcattta taattggatg tgctcctgaa
     1021 tctacttttt atatataaaa aaatctgctg tgcacaattt tccatgtaca ttacaactgg
     1081 ttttgttttc tgttttgttg atgggggttg ggagggggga gggaactttt atttattgtg
     1141 ttcacagact ccatcctgtc agcatatccg cttaaattta gttctttctt ccagctatac
     1201 tctgtactat cagttttgat ataactatat atataaatat aaaattatat ataaagggtt
     1261 atttgaaacc aatccatggc aacgctggtg cttgatacac tgtgaagtga atacaacatt
     1321 gaacagttga cacagatctg ggacagtccc ttctatgaaa gtgctgaaat ataattaaaa
     1381 tcagtcttac atgaagtatg ttccaacctg cgtgggaact tgactctctc atctgtcttt
     1441 taagagtact ggataatata aaaaatatat tttttaaaca atgtgatctc aaatttaaag
     1501 actgctccag atagcctgca tttgcaatgg gctaattgac aaatggcaag tggttcagtt
     1561 ggagggcttt gaccattcgg aagtaacaag actagctcca gaatgccaag tattcgtgta
     1621 aattatggtt acatgttaac attgctgttt ttattaagca ctcatgaaaa tatggtgttc
     1681 tgtatctcga attccggcct tttcccagac ctctgctcat gcctgaggtg tacctagcag
     1741 ctgtcttagt tctagggttg cagtactgca tttttaaccc acaccgcctg gggaagcagt
     1801 cccgggtcta ctctgatgtt gcagtggtgg attttgtgat catgacctgt ttgcttctcc
     1861 ccctacctcc aacctccaaa ccctcaccta ccaatgtggt cgtcagtctt cttagaacct
     1921 actatggttc agttaataaa caaggtagtc caccacacat ccagacctga cacagagatc
     1981 ttccagtctc tggagtcatt tctcagttcc ttgtgtggga aaaggattgc agggttgcac
     2041 tggtgagcta cagggagagc tcaacttccc aggaaagtta acgaatggtg ctctttgttg
     2101 actgaaccct ggacgtttct ttccattttt accattttgg ggttgggaga taatcaaaga
     2161 ccactgacaa cagtttatca ccccatctca ccccaagtct gggtgactct gctttgctct
     2221 tagattcagg gtatctcttc tatctgactt taccttcata gccactgagt ttgtagtgct
     2281 taagtcatct taagcatgag aacgtggtgt taaccttcct ttagtttatc acactcaagg
     2341 actcatagga gagcgtgtaa ggaaaacacc acatcttggt gttaaaagaa ccaggttttc
     2401 ttaataaaag aatttctatc tgtggaggca acaagttaag aacatattaa cagcttgaat
     2461 tgagtagcca acaggaatgg ttccattcac atttacatta aaaccagtca tttgatgcgc
     2521 cggagtctgt ccgcaaaggc agtgctattt gtcaatgggc tcctgttctc aacgcatgga
     2581 caatgctccc ctctttttaa aacagtgctt gtgtctggga tgcaagctgt acttaccttt
     2641 ttaaatacct ttttaaagta tttattaatg aaccaaagga aatcaggtgc tttctgtaag
     2701 catcagaata tataatacat agtgatttga ctatgaattt taaatccaca ttttaatatt
     2761 agtggggtat tgcaaagaca ttccttctaa agttttaata ttccttttat taagggtctc
     2821 agggagggtt aattagtcag ccatatttat tttccagagg tgtaaggaat tgctaagttt
     2881 tttaattaac tttttaaaaa attaaatgcc accaaattca tgtggattgc actgctcttt
     2941 gaaccaataa gtgttggtat gcactttgtt cagaaacact gtgtactttt tcaaaatgag
     3001 tttcatgtaa agtgattgga tcccctagat tagtggaaaa ggctgattta ccagctcctc
     3061 ataggctact aattcattca ttgccggtgt cttggttttt cagttttgcc tccatgataa
     3121 attaaagaat aaggagaggt gatgggaagg aaggaccact tcagaacgag tggagtaaac
     3181 ttgccttgag gtagaagctg cagtggtgga gtctaagcaa tcagatgttc ctggctgccc
     3241 tgtctcagct gtcaagggcc gcatcaggac agagagctga taggtgctac aggatgacat
     3301 cctcaggcat gcattctgga aatggaattc ctattagctt cctgcattta cagtttgccc
     3361 tactatagta ctcagtaggt aaaaacacta gtgtagctta caaagacatt aagaggacca
     3421 gaaatacttg gtattcagtg gcacagaaag cagatgaaaa caaaaagcac agtgttaagg
     3481 cttgcaagtt tcccgtttgt ttagtacata atctttcaca ctcgtgtgca cacacagagc
     3541 caagctgata tgctctgccc aagtcatgca gttgggaggg ggggggaaga catcttgaca
     3601 cccacaagaa tattttaatc aaaacctttc cgtttggatc tggatacttc aaaacattgg
     3661 cagacgcttc tgtgagttta gctccactaa gatgtctcgc ctgccttatt acgaccattc
     3721 tcagtctaca tttttaagct gccgtatctt aaattattga gaatttatta attgctgaat
     3781 atataataac ctttgcttgt atgttaccga aaatggttta agagccaaca tttagagtgt
     3841 gacaatggag ctgaacagtt tctaacgcgc aagcagttct gttcttgtgt atgacttgta
     3901 accttaattt actgtgtaaa gatggttaca ttatttcctt agctttgttt gttggagaca
     3961 gatagcgaat gcttgttaag tatgtcagaa cataatcttc ccttgtgaac ttttgttaat
     4021 gtcttatacg agctctattt tccatttgcc cagaaagatg gcttgtataa cgctttggaa
     4081 gtttctgctc cgtccgtctt agagctgaca gtctgttagg tttgttttct cttcatgcta
     4141 aagtgtcggt ggttttgtga actggtcaga aattcacagg tcttaaatgt tttgggggaa
     4201 atttatattg gacactgctc tttgtctagc aaataaaaga tgttaatata ttcctgttat
     4261 tggcatgtgc acgactatgt tattagaagc cactttatca ttttcctgct ttaaatagaa
     4321 atgtctattt atgaattctg cttgtagttt tttcacaaat aaaatagtaa aattta
//
