LOCUS       NM_198758               2080 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus RUN domain containing 3A (Rundc3a), mRNA.
ACCESSION   NM_198758 XM_221044
VERSION     NM_198758.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2080)
  AUTHORS   Chen ZJ, Miao ZH, Vetter M, Dulin N, Liu S, Che D, Hughes B, Murad
            F, Douglas J and Chang CH.
  TITLE     Molecular cloning of a regulatory protein for membrane-bound
            guanylate cyclase GC-A
  JOURNAL   Biochem Biophys Res Commun 278 (1), 106-111 (2000)
   PUBMED   11071862
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DY319760.1, CB797318.1 and BC127472.1.
            
            On Feb 26, 2008 this sequence version replaced NM_198758.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-368               DY319760.1         35-402
            369-475             CB797318.1         50-156
            476-2080            BC127472.1         60-1664
FEATURES             Location/Qualifiers
     source          1..2080
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..2080
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /note="RUN domain containing 3A"
                     /db_xref="GeneID:303569"
                     /db_xref="RGD:735057"
     exon            1..344
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
     CDS             238..1602
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /note="guanylate-cyclase regulatory protein; Rap2
                     interacting protein"
                     /codon_start=1
                     /product="RUN domain-containing protein 3A"
                     /protein_id="NP_942053.2"
                     /db_xref="GeneID:303569"
                     /db_xref="RGD:735057"
                     /translation="MEASFVQTTMALGLPSKKASSRNVIVERRNLITVCRFSVKTLLE
                     KYTAEPIDDSSEEFVNFAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACS
                     KVPNNCVSSIENMENISTARAKGRAWIRVALMEKRMSEYITTALRDNRTTRRFYDSGA
                     IMLREEATVLTGMLIGLSAIDFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEE
                     ERHSAESSTSEDNSPEHPYLPLVTDEDSWYNKWHKMEQKFRIVYAQKGYLEELVRLRE
                     SQLKDLEAENRRLQLQLEEAAAQNQREKRELEGVILELQEQLPDPPPPPRTGLIPGDH
                     APLAQGSKELTTALVNQWPSLSTLSRPEGASNSKLFRRHSFMSTEPLSAEASLSSDSQ
                     RLGEGKRDEEPWGPIGKDPTPSMLGLCGSLASIPSCKSLASFKSNECLVSDSPEGSPA
                     LSPS"
     exon            345..460
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
     exon            461..609
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
     exon            610..695
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
     exon            696..785
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
     exon            786..866
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
     exon            867..1032
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
     exon            1033..1190
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
     exon            1191..1352
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
     exon            1353..1459
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
     exon            1460..2052
                     /gene="Rundc3a"
                     /gene_synonym="GCRP; Rap2ip"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgacgagccc cggctcagca cctcggagag ctccctcccc ggccttgttt tgctccggaa
       61 tcgctgctgg gggagggagc gaaggggccg gccctaggtg tccaggccga gggatggcag
      121 tgaagaggac gaagggcccc cgggggcaga gggcccaggc gtgatcctgc gaggggggcc
      181 ggggcgccgg gtggggtggg gggcagcggg cggcggcagt agtggccgca catctggatg
      241 gaagcgagct ttgtccagac caccatggct ctggggctgc cctccaagaa agcatcttcc
      301 cgcaacgtga tcgtggagcg caggaacctg atcaccgtgt gcaggttctc tgtgaaaacc
      361 ttgctagaga agtacacagc agaacccatc gatgattcat ccgaggagtt tgttaacttc
      421 gcagccattt tagagcagat cctcagccac cgatttaaag cttgtgcccc agcaggtcca
      481 gtgagctggt tcagctcaga tgggcaacgg ggcttctggg actatatccg gctggcctgc
      541 agcaaagtgc ccaacaactg cgtaagcagc atcgagaaca tggagaacat cagcacagct
      601 cgagccaagg gccgggcgtg gatccgggtg gctctgatgg agaagcgtat gtcagaatac
      661 atcactacag ctcttcggga caaccgaact accagacggt tctatgactc cggagccatc
      721 atgctgcgag aggaagccac tgtcctcaca gggatgctga tcggactcag cgctatcgac
      781 ttcagcttct gtctaaaggg cgaagttctg gacgggaaga cgccggtggt catcgattac
      841 acaccctacc taaaattcac ccaaagctac gactacctga cggatgagga ggagaggcac
      901 agtgcagaga gcagcaccag cgaggacaac tcaccagaac acccctacct gcccctcgtc
      961 accgatgaag acagttggta caacaaatgg cacaagatgg aacagaagtt tcgcattgtc
     1021 tacgctcaga agggatacct ggaggagctg gtgcgtctgc gggagtcgca gctgaaggac
     1081 ctggaggcgg agaaccggcg gctgcagctg cagctggagg aggcagcggc acaaaatcag
     1141 cgtgagaagc gggagctgga aggagtgatc ctggagctgc aggagcagct gcctgatccc
     1201 cctccccctc ccaggacagg tctgatcccc ggtgaccatg cccccctggc ccagggttcc
     1261 aaggagctca ccacagccct ggtcaaccag tggccctccc tgagcacact cagtagaccg
     1321 gagggtgcca gcaactccaa gctatttcgg agacacagct tcatgagtac ggagcccctg
     1381 tctgcagagg ccagcctgag ctcagactcc cagcgcctgg gtgagggcaa gagggacgag
     1441 gaaccctggg gccccatcgg gaaggacccc acgccctcca tgctgggcct ctgcggctcc
     1501 ctggcctcca tccccagctg caagtccctg gcgagcttca aatccaacga atgcctggtg
     1561 agcgacagcc ctgagggcag cccagcactc agccccagct gaggagcagc aagggcaatg
     1621 ccagccccac ctgccagggg ccatggacaa ctgccacctt ttgagtcccc caccccaggc
     1681 cacccttcaa gaacaatacc cagctagcct caggtcccag ctagcctcgg gtctctaggg
     1741 aaagacaacc tgagcctctt tcctgcttca gcttcctgcc aaagaggcag gagctacatg
     1801 gggaagtggt ggggcaagga gggacgccca ggttacaggt cgtcagtccc ctggggaagc
     1861 cactccattc cgtggtcctg aaggctgcct ggttccttct gttcatcttc cacacttgcc
     1921 tcagaagcag gtggtccagc cctggcattc ctgctgccct gcctctggtc taaccctgtg
     1981 taccctctga agtcaccctt cctcggtacc tatgtgggga gagattaggc aaataaaaac
     2041 cagaggactg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
