LOCUS       XM_039081612            2546 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus receptor (chemosensory) transporter
            protein 3 (Rtp3), transcript variant X2, mRNA.
ACCESSION   XM_039081612
VERSION     XM_039081612.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2546
                     /gene="Rtp3"
                     /gene_synonym="Tmem7"
                     /note="receptor (chemosensory) transporter protein 3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 4 ESTs, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 105 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:316018"
                     /db_xref="RGD:1310546"
     CDS             651..2048
                     /gene="Rtp3"
                     /gene_synonym="Tmem7"
                     /codon_start=1
                     /product="receptor-transporting protein 3 isoform X1"
                     /protein_id="XP_038937540.1"
                     /db_xref="GeneID:316018"
                     /db_xref="RGD:1310546"
                     /translation="MTEDDVGQWQHVFQELIQEVKPWHKWTFTPDKELLPDVLKPGWT
                     QYQQKAFARFHCSSCSRSWASGRVLIIFHMRWCEKKAKGQVKMRVFAQRCNQCPEAPF
                     AAPEFTWDNISRILNNLLFRILKKCYKEGFKQMGEIPLLGDTSLEGPHDSGNCEACLL
                     GFCAQNDLGQASKPPAPPLSPTSSKSAREPKVTAACPDLPCSQSSSKVEKPQASDVSP
                     QASNPSKEDPKVSRTSKPSTNPRLTIKQLSEVSSSALECVIQMPSPISSNRAADTAKN
                     TRSKAPKASLSSSSYVPPTSSYVPPTSSTSSLYVPPTSSYVPLTSSYVPLTSSSNVPP
                     SSFLYAPPTPSYVPSTSSSRRPPANTACQVERSAPIHPESQSSCCKACCGGCGGCCGG
                     CGGCCGACCAGCGGCCECFCEVLEGCCGCFGKVFLGCGECFCKVFLGCCKFGSESPQC
                     CLFFLILFLLLWYLL"
ORIGIN      
        1 agacctccgt gaccaggcta cagttggtag gcggagtgga ggagctggat gtctacggat
       61 caccatcctc ctgagataca aggtgtagcc gaggggcttc ccagagtgtg gggatcccag
      121 ggaagccctt tttgcctcta gcaggagctc agcagcacga tagatggaga tttccaaatg
      181 ttagaagcag gaaaggcaag tgtgccttcc aaccattgca gggactctgc cagaggcagc
      241 tattccctga tttggattcc aacactttct ccctctctag tacattgaga tattaaaaac
      301 caaagcttgg agctttgtga tttcttgtgg ctgtccactg ctgccctctg aacttgggaa
      361 cagactcaat tgacctttgt ccctcgtaca gaaggatttg aactacattc ccaattcgtg
      421 tttgggattg ctagcccaaa gaccatggtc tgaggctggc cataacactg ttgtggtgag
      481 ggagaggagg aggtgaagtc tggggaaact ttgtttccaa acgtcacagg aagcccctcc
      541 ccttgcttcc ttcttttctg ccttgctgtc tgagtggaca attcacttct tgccacaggt
      601 ctgtctggat ccagaagacc ctgccccagc ctgggcacag ccctgtagcc atgacagaag
      661 acgacgtagg acaatggcaa catgtgttcc aggagctgat tcaagaggtg aaaccgtggc
      721 acaaatggac cttcacacca gacaaggagc ttcttcccga tgttctaaag ccaggatgga
      781 cgcaatacca gcaaaaggcc tttgccaggt tccactgttc ttcctgctct cgaagttggg
      841 cctctggcag agtcttgatt atcttccaca tgcgctggtg tgagaagaag gccaaggggc
      901 aggtgaagat gagggtgttt gctcagagat gtaatcagtg ccccgaggct ccatttgcgg
      961 ctccagagtt cacatgggac aacatctcga ggattttgaa caacttgctc ttccgaattc
     1021 tgaagaagtg ttataaagaa gggtttaagc agatgggcga gatccctttg cttggggaca
     1081 ccagtctcga aggaccacat gacagtggca actgtgaggc ctgtctgctg ggcttttgtg
     1141 ctcagaatga cttaggccaa gcctcaaaac caccagcacc cccattatct cctacctcct
     1201 ccaaatccgc cagggagcct aaggtcactg ccgcctgtcc cgaccttccc tgctcacagt
     1261 cctcctctaa agtggagaag ccccaagcat cggacgtgag cccccaagcc agtaacccct
     1321 ccaaagagga ccctaaggtt agccgcacct caaaaccatc aactaatcca agactgacta
     1381 tcaaacagct gtcagaagta agctcgtccg ccctcgaatg tgttattcaa atgccttctc
     1441 ccatcagcag caacagagca gcagatacag caaagaacac cagatccaag gccccaaagg
     1501 catccctctc atcctcctcc tatgtcccac ccacttcctc atatgtccca cccacttcct
     1561 ccacttcctc cttgtatgtc ccacctactt cctcatatgt cccactcact tcctcatatg
     1621 tcccactcac ttcctcctca aatgtcccac cctcttcctt tttatatgcc ccacccactc
     1681 cctcatatgt cccatccact tcctcctcac ggagaccacc agcaaacacc gcttgccaag
     1741 tagagagaag cgccccaatc cacccagaaa gccagtcttc ctgctgcaaa gcttgctgcg
     1801 ggggctgcgg gggctgctgt gggggctgcg ggggctgctg cggggcctgc tgcgcaggct
     1861 gtgggggctg ctgcgagtgc ttctgtgagg tgttagaagg ctgctgcggg tgcttcggta
     1921 aagtcttctt gggctgcggc gagtgcttct gtaaggtctt cttgggctgc tgtaaattcg
     1981 ggtcagagag tccacagtgt tgcctgttct ttctaatctt gtttttgttg ctgtggtact
     2041 tattataaaa tgcaatatac gagccttgaa aaaaaaagaa ccctgagtgg gaaaacaaaa
     2101 agaattgcaa catcccaaaa gagccacacg ttgagtaatc ccctttatgc gaaatgtcga
     2161 taaaatcagt agaatccaga ggtagctacc ggggactgga gaagggggaa agtacaaagc
     2221 cacggtttaa gcaatgcggc ctttgtggag aggtgatgga catttttagg aatttggtgg
     2281 gaacagtagc agcttcttag cactgtcagt gcactaagcc gctgagcttt ccctcctaag
     2341 atggtgagtt tccctaggct ggagagatgg ctcagtggtt aagagcactg ggtgctcctc
     2401 cagaggacct gagttcaagt cccagcaact acacggtggc tcagagcaca atctatcatg
     2461 gcacctgatg ccctcttctg tcatcaggca catgagcaaa tagaacgttc aaatacacat
     2521 caataaacag taagcttttg aaaaaa
//
