LOCUS       XM_006243965            2281 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus receptor (chemosensory) transporter
            protein 3 (Rtp3), transcript variant X1, mRNA.
ACCESSION   XM_006243965
VERSION     XM_006243965.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006243965.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006243965.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2281
                     /gene="Rtp3"
                     /gene_synonym="Tmem7"
                     /note="receptor (chemosensory) transporter protein 3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 5 ESTs, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 97 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:316018"
                     /db_xref="RGD:1310546"
     CDS             386..1783
                     /gene="Rtp3"
                     /gene_synonym="Tmem7"
                     /codon_start=1
                     /product="receptor-transporting protein 3 isoform X1"
                     /protein_id="XP_006244027.1"
                     /db_xref="GeneID:316018"
                     /db_xref="RGD:1310546"
                     /translation="MTEDDVGQWQHVFQELIQEVKPWHKWTFTPDKELLPDVLKPGWT
                     QYQQKAFARFHCSSCSRSWASGRVLIIFHMRWCEKKAKGQVKMRVFAQRCNQCPEAPF
                     AAPEFTWDNISRILNNLLFRILKKCYKEGFKQMGEIPLLGDTSLEGPHDSGNCEACLL
                     GFCAQNDLGQASKPPAPPLSPTSSKSAREPKVTAACPDLPCSQSSSKVEKPQASDVSP
                     QASNPSKEDPKVSRTSKPSTNPRLTIKQLSEVSSSALECVIQMPSPISSNRAADTAKN
                     TRSKAPKASLSSSSYVPPTSSYVPPTSSTSSLYVPPTSSYVPLTSSYVPLTSSSNVPP
                     SSFLYAPPTPSYVPSTSSSRRPPANTACQVERSAPIHPESQSSCCKACCGGCGGCCGG
                     CGGCCGACCAGCGGCCECFCEVLEGCCGCFGKVFLGCGECFCKVFLGCCKFGSESPQC
                     CLFFLILFLLLWYLL"
ORIGIN      
        1 gctgaggagc ttccagcttg ggaaacaacc agggcagtag gccaatggcc atctgggtga
       61 taggaagacc caccccatct gtggacggag tcttggggta tatagacact cagaatcgtg
      121 tctgcctctc ataggacact gcccttccaa ctctgctcct ctctgcctag ttccccttcc
      181 ccttcctcag tttggggtga tggtgtgaac caaccttctt gtggaggaag gcaatgggtc
      241 cctgtcggtc ctgagctagc agatttccac ccatttaagg agacatcacc taatctccca
      301 ggcaaacact gactgcacca actttgattt ctggtctgtc tggatccaga agaccctgcc
      361 ccagcctggg cacagccctg tagccatgac agaagacgac gtaggacaat ggcaacatgt
      421 gttccaggag ctgattcaag aggtgaaacc gtggcacaaa tggaccttca caccagacaa
      481 ggagcttctt cccgatgttc taaagccagg atggacgcaa taccagcaaa aggcctttgc
      541 caggttccac tgttcttcct gctctcgaag ttgggcctct ggcagagtct tgattatctt
      601 ccacatgcgc tggtgtgaga agaaggccaa ggggcaggtg aagatgaggg tgtttgctca
      661 gagatgtaat cagtgccccg aggctccatt tgcggctcca gagttcacat gggacaacat
      721 ctcgaggatt ttgaacaact tgctcttccg aattctgaag aagtgttata aagaagggtt
      781 taagcagatg ggcgagatcc ctttgcttgg ggacaccagt ctcgaaggac cacatgacag
      841 tggcaactgt gaggcctgtc tgctgggctt ttgtgctcag aatgacttag gccaagcctc
      901 aaaaccacca gcacccccat tatctcctac ctcctccaaa tccgccaggg agcctaaggt
      961 cactgccgcc tgtcccgacc ttccctgctc acagtcctcc tctaaagtgg agaagcccca
     1021 agcatcggac gtgagccccc aagccagtaa cccctccaaa gaggacccta aggttagccg
     1081 cacctcaaaa ccatcaacta atccaagact gactatcaaa cagctgtcag aagtaagctc
     1141 gtccgccctc gaatgtgtta ttcaaatgcc ttctcccatc agcagcaaca gagcagcaga
     1201 tacagcaaag aacaccagat ccaaggcccc aaaggcatcc ctctcatcct cctcctatgt
     1261 cccacccact tcctcatatg tcccacccac ttcctccact tcctccttgt atgtcccacc
     1321 tacttcctca tatgtcccac tcacttcctc atatgtccca ctcacttcct cctcaaatgt
     1381 cccaccctct tcctttttat atgccccacc cactccctca tatgtcccat ccacttcctc
     1441 ctcacggaga ccaccagcaa acaccgcttg ccaagtagag agaagcgccc caatccaccc
     1501 agaaagccag tcttcctgct gcaaagcttg ctgcgggggc tgcgggggct gctgtggggg
     1561 ctgcgggggc tgctgcgggg cctgctgcgc aggctgtggg ggctgctgcg agtgcttctg
     1621 tgaggtgtta gaaggctgct gcgggtgctt cggtaaagtc ttcttgggct gcggcgagtg
     1681 cttctgtaag gtcttcttgg gctgctgtaa attcgggtca gagagtccac agtgttgcct
     1741 gttctttcta atcttgtttt tgttgctgtg gtacttatta taaaatgcaa tatacgagcc
     1801 ttgaaaaaaa aagaaccctg agtgggaaaa caaaaagaat tgcaacatcc caaaagagcc
     1861 acacgttgag taatcccctt tatgcgaaat gtcgataaaa tcagtagaat ccagaggtag
     1921 ctaccgggga ctggagaagg gggaaagtac aaagccacgg tttaagcaat gcggcctttg
     1981 tggagaggtg atggacattt ttaggaattt ggtgggaaca gtagcagctt cttagcactg
     2041 tcagtgcact aagccgctga gctttccctc ctaagatggt gagtttccct aggctggaga
     2101 gatggctcag tggttaagag cactgggtgc tcctccagag gacctgagtt caagtcccag
     2161 caactacacg gtggctcaga gcacaatcta tcatggcacc tgatgccctc ttctgtcatc
     2221 aggcacatga gcaaatagaa cgttcaaata cacatcaata aacagtaagc ttttgaaaaa
     2281 a
//
