LOCUS       NM_001033890            2148 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus replication termination factor 2 domain
            containing 1 (Rtfdc1), mRNA.
ACCESSION   NM_001033890 XM_215952
VERSION     NM_001033890.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Kottemann,M.C., Conti,B.A., Lach,F.P. and Smogorzewska,A.
  TITLE     Removal of RTF2 from Stalled Replisomes Promotes Maintenance of
            Genome Integrity
  JOURNAL   Mol Cell 69 (1), 24-35 (2018)
   PUBMED   29290612
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC101880.1.
            
            On Sep 30, 2005 this sequence version replaced XM_215952.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC101880.1, EX489102.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..2148
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /note="replication termination factor 2 domain containing
                     1"
                     /db_xref="GeneID:296410"
                     /db_xref="RGD:1311072"
     exon            1..132
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /inference="alignment:Splign:2.1.0"
     CDS             64..984
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /note="UPF0549 protein C20orf43 homolog; replication
                     termination factor 2 domain-containing protein 1; protein
                     RTF2 homolog"
                     /codon_start=1
                     /product="replication termination factor 2"
                     /protein_id="NP_001029062.1"
                     /db_xref="GeneID:296410"
                     /db_xref="RGD:1311072"
                     /translation="MGCDGGTIPKRHELVKGPKKVEKVDKDAELVAQWNYCTLSQEVL
                     RRPIVACELGRLYNKDAVIEFLLDKSAEKALGKATSHIRSIKNVTELKLSDNPAWEGD
                     KGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTC
                     GAAFQEEDIIVLNGTKEDVEMLKRRMEERRLRAKLEKKTKKPKTAESASKLGISQDSA
                     GPSKAKAGKSEEADPDPREKKSSLAPRGTASNGSASGKVGKPPCGALKRSIADSEESE
                     TYKSIFTSHSSAKRSKEESAHWVTHTSYCF"
     exon            133..227
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /inference="alignment:Splign:2.1.0"
     exon            228..321
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /inference="alignment:Splign:2.1.0"
     exon            322..461
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /inference="alignment:Splign:2.1.0"
     exon            462..540
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /inference="alignment:Splign:2.1.0"
     exon            541..654
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /inference="alignment:Splign:2.1.0"
     exon            655..709
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /inference="alignment:Splign:2.1.0"
     exon            710..805
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /inference="alignment:Splign:2.1.0"
     exon            806..2116
                     /gene="Rtfdc1"
                     /gene_synonym="RGD1311072; RTF2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacggcttct agtgtttgct aaggcttctg actattgcta aggcttctga ctccggcttt
       61 gggatgggtt gcgacggagg cacaatcccc aagaggcacg agctggtgaa ggggccgaag
      121 aaggtcgaga aggttgacaa agatgccgaa ctggtggccc agtggaacta ctgtactcta
      181 agtcaggaag tcctgaggcg cccaatagtt gcctgtgagc ttggcagact gtataacaaa
      241 gatgctgtca tcgagtttct gctggacaaa tctgctgaga aggccctagg gaaggccacc
      301 tcacacatta gaagcatcaa gaatgtgaca gagctcaagc tgtctgacaa ccctgcctgg
      361 gaaggagata aagggaacac caagggtgac aagcatgacg accttcagcg agcacggttc
      421 atctgccctg tggtgggcct ggagatgaac ggccggcaca ggttttgctt cctccgatgc
      481 tgtggttgtg tgttttctga gcgcgccttg aaggagataa aagctgaagt ttgtcacaca
      541 tgcggggctg ccttccagga ggaggacatc attgtgctca atggcaccaa ggaggatgtg
      601 gagatgctga agaggaggat ggaagagagg aggctgcggg ccaagctgga gaagaaaaca
      661 aagaaaccga agacagccga gagtgcttca aagctgggca tctcacaaga ctctgcaggg
      721 ccatcaaagg cgaaggcggg caagtctgag gaggcggacc ccgatcctag ggagaagaaa
      781 agctccttgg cgcccagggg cacagcatct aatggcagtg cttctgggaa agttggcaag
      841 cccccatgtg gggccctgaa gagatccatc gcagacagtg aggagtctga aacctacaag
      901 tccatcttca caagccacag ctctgccaag cgctccaagg aggagtctgc ccactgggtc
      961 acccacacgt cctactgctt ctaaagccca gctgggccct cgccacaggg cttccctgtg
     1021 gccctcaggg ccacacttgc ttggtgtggc atcgtgctat aaagctgtcc tctgcaatct
     1081 tcgaccggcg tggtcacttg ctgtgagatc ttgtgggtcc tgggagtgag aagtcccaca
     1141 cctgcccaca ggctgtccct ccacttagcc cggagactgc tgctctttag ctaacagaaa
     1201 gctctgactc ctcactgtgt gctcagctca tttccgaaat cagagtggtc aagggggaag
     1261 gccctgagct tagggacaga ctccaacagt cttagacctt ggtcctcgtg agagaggaaa
     1321 cacacctgac tgcctggtac aaaccaaagc cctttctctc gtcttccttc tctctccaat
     1381 accttgataa gaaatggcag ccatgtaggt gatggtggca ggcaggaatg gctcctttgc
     1441 catccccacc gttaaactcg gaacctctgt aacacttcac agggcacgat agaactgcct
     1501 ctaggccagt tccaaaacct gcttctgggc tgggcagctg gctccctcag tggacacttg
     1561 tggaccagag tttgggtccc cagaactttt ataaaagccc agtgagccct taaccagcct
     1621 gggatcccag cccttaagag gcagacgtga gattccctgg gcaaggtgct aagttcaggg
     1681 tttggggaga ccctgctcag aaactagctg gagtgcaatt aagagattcc cagtgtcagc
     1741 ctctggcctc cacacatgcc cacaaacctg caaaccccta aaggccctgt ttccaaaaca
     1801 aacatggtgg catgtgtagt ccaagctgtc agaaggctga ggcaggaaga tcacagagag
     1861 gtcaaagctg gcagggttac atagcaggac ctcacctcag gaagcaaccc aagaaaagca
     1921 cctgctccca ctgcccctgg gtttctgctt gcaagggatg aagcttggcc ccaaacacgt
     1981 agcatttgtt ctgggacagt gctgggggcg ctgtggaagt gtgcaacagg acagggtgtg
     2041 aatgagtgtc gtccaagaga acctgggcgc gtgacctttg tacttagaaa ttcaaaataa
     2101 aggttgtaga aatgttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
