LOCUS       NM_001408901            3505 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus regulator of sex limited protein 1 (Rsl1),
            transcript variant 2, mRNA.
ACCESSION   NM_001408901
VERSION     NM_001408901.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3505)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.8201.1,
                                           SRR26360194.326923.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-411               JAXUCZ010000002.1  86448345-86448755
            412-538             JAXUCZ010000002.1  86457964-86458090
            539-634             JAXUCZ010000002.1  86458707-86458802
            635-3505            JAXUCZ010000002.1  86469087-86471957
FEATURES             Location/Qualifiers
     source          1..3505
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q23"
     gene            1..3505
                     /gene="Rsl1"
                     /gene_synonym="Zfp974"
                     /note="regulator of sex limited protein 1"
                     /db_xref="GeneID:685925"
                     /db_xref="RGD:1587849"
     exon            1..411
                     /gene="Rsl1"
                     /gene_synonym="Zfp974"
                     /inference="alignment:Splign:2.1.0"
     exon            412..538
                     /gene="Rsl1"
                     /gene_synonym="Zfp974"
                     /inference="alignment:Splign:2.1.0"
     CDS             415..2028
                     /gene="Rsl1"
                     /gene_synonym="Zfp974"
                     /note="zinc finger protein 974; zinc finger protein
                     58-like; zinc finger protein 455-like"
                     /codon_start=1
                     /product="similar to zinc finger protein 455"
                     /protein_id="NP_001395830.1"
                     /db_xref="GeneID:685925"
                     /db_xref="RGD:1587849"
                     /translation="MLSFWDVAIDFSPEEWEWLKPAQWSLYRDVMLENYSNLVFLGLA
                     VSKPQLVTFLEQRPEPMDVKRQEAATVHSGIALNDPNCYSKTTNCKSLLIKRRRLHKG
                     EKPYKCEECGKALGSLKTLSIHQRLHTGDKPYKCKECHKAFSTRSALFIHMKNHTDEK
                     THKCEECGRLFYYPSMLKQHQRIHSGEKLYKCEECGKSFCYLSMLKQHQRIHSGEKLY
                     KCEECGKSFCYLSMLKQHQRIHSGEKLYKCEECGKSFCYLSMLKQHQRIHSGEKLYKC
                     KECGKSFCFLSFLKDHQRNHCGENPYQYEEYVKIFPHPVHLQEHEQIHIGEKLFKCSE
                     CHKAFCNHSALRIHMRVHTGEKPYKCVECGRCFSFSSCLRRHEHIHSENKPYKCEDCG
                     RCFCSSSSRRRHQTFHSECEECGKRFSCSVSLQEHQTIHTGEKPYKCENCHKAFPYRS
                     SLRRHKTVHTREKSYKCEKCSRCFSSFSSLVRHQVIHSEDNPHKCVECGKAFVNVYGL
                     TRHMTVHTGEKSYNSLKKCILIQPLKDIK"
     exon            539..634
                     /gene="Rsl1"
                     /gene_synonym="Zfp974"
                     /inference="alignment:Splign:2.1.0"
     exon            635..3505
                     /gene="Rsl1"
                     /gene_synonym="Zfp974"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgttttttta caagtgtgtc ttcctcaaag ttttgcgagg gtcctgtgtg gctgttcatt
       61 gtgtagtctc tgtcatgaag gttggtccag gaaatagcac agcctggggc tttgtgctag
      121 cagcgggcgc tgggcggggg gagggaggca ggtagacctt tcggtgagag cagacctagg
      181 ctgggttgga aggcggaaga agccgccagt ttttgttctg ctgaactggc tgggtcacgt
      241 gaggttgcag ttctggactg ggaacagggc ggttgggttg ttccctgggg tatggtttct
      301 ttaggacacc gcgagcagtc ggagtacgcc ttggactttt agaacaccag aggagtttgg
      361 tagcgcggga gtagataatc tggcacgggg aaggattgca agctaatgat ggatatgctc
      421 tcattctggg atgtggccat tgatttctct ccagaagagt gggagtggct gaagcctgct
      481 cagtggagtc tgtacaggga tgtgatgctg gaaaattaca gcaaccttgt gttcctgggt
      541 cttgctgtct ctaaaccaca gctggtgaca tttctggagc aaagaccaga gcctatggat
      601 gtgaaaagac aagaggcagc tactgtacat tcaggaatag cactcaatga tcctaactgt
      661 tacagcaaga ccactaactg taaatcactc cttattaaac gacgaagact tcataaaggg
      721 gagaaaccct acaagtgtga agaatgtggt aaggcccttg gttctcttaa aacactttct
      781 atacaccaga gacttcatac tggagacaaa ccctacaagt gtaaagagtg tcataaggcc
      841 tttagtactc gctcagcact ttttatacac atgaaaaatc atactgatga aaaaacccac
      901 aagtgtgaag aatgtggcag attattttac tatccttcaa tgctgaaaca acatcagaga
      961 attcattctg gagagaaact ctacaagtgt gaagaatgtg gaaaatcatt ttgctatctt
     1021 tcaatgctga aacaacatca gagaattcat tctggagaga aactctataa gtgtgaagaa
     1081 tgtggaaaat cattttgcta tctttcaatg ctgaaacaac atcagagaat tcattctgga
     1141 gagaaactct ataagtgtga agaatgtgga aaatcatttt gctatctttc aatgctgaaa
     1201 caacatcaga gaattcattc tggagagaaa ctctataagt gtaaagaatg tggaaaatcc
     1261 ttttgctttc tctcattcct taaagatcat caaagaaatc actgtggaga aaatccctac
     1321 caatatgagg aatatgtaaa aatatttccc catcctgtac accttcagga acatgaacaa
     1381 atccatattg gagagaaact cttcaaatgt tcagaatgcc acaaagcatt ttgtaatcac
     1441 tcagccctta ggatacacat gagagttcat actggggaga aaccttacaa gtgtgtagag
     1501 tgtggtagat gtttttcctt ctcttcttgc cttagaagac atgaacacat tcactctgaa
     1561 aacaaaccct acaagtgtga agactgtggc agatgctttt gctcatcttc atcccgcaga
     1621 cgacatcaaa cattccattc tgaatgtgaa gaatgtggca aaaggttttc ttgttctgta
     1681 agccttcagg aacatcaaac aatccataca ggagagaaac cttataagtg tgaaaattgt
     1741 cacaaagcct ttccttatcg ctcatccctt aggagacata agacagttca tactagagag
     1801 aaatcgtaca agtgtgaaaa gtgttctagg tgcttttcct cattctcatc ccttgtacga
     1861 catcaagtaa ttcactctga agacaatcca cacaagtgtg tggaatgtgg caaagccttt
     1921 gttaatgttt atggccttac tcgacacatg acagttcata ctggagagaa atcctacaat
     1981 agtcttaaaa agtgtattct tattcagccc ttaaaagaca tcaaatagtt catactgaat
     2041 taaactctgt gactgtgtgg agtgttgtag cagtcagtat taaagaagaa tctaccagct
     2101 ctggaaggag acatggcatc tgttggggca tttcatttta atcaatgtag ttttgcaacc
     2161 caacttgctg agtttttaat ttccatccca cctgactctg gctactcttt gggccctgct
     2221 gtgatctcgc tgccatggct agtcccacat tgctgctggc tcatctctgg ccccaacagc
     2281 agccaccctc ttgtgactct ttcctgtgaa ctctattcac agccccagca ttggcctcct
     2341 gtggttatag ttacaactct cagtaaccca ttaaaatcaa aactcaatag gtttgtaatt
     2401 tatcaataag atttatatca gtaagtcctc atatcacaaa acatccacaa taaactctga
     2461 aacaattaat gttaatataa actgcccaac tagataagac aaattaaact ataaaaattc
     2521 ttcccttatg aaatattcat aactacctgt ggccaattga ggccacacag atctgagcca
     2581 tccttctctt tctccatctt ggttgttctc cctctttctc ctctctcctt tctccaaaac
     2641 tctgtgccca ccttactttt tcactgctga gtcacagccc ttgccttatc ttgtgtttgc
     2701 ctcacctgca tatagacata atcaacagag tgtggtaaca atctttccta atcttcaaac
     2761 tctgtgcacc tcacaccaat ccatatggta gactattaag tgaattagtt tggaatgtca
     2821 acacaaacat cttacttcta ccagcacaaa tattgagaat gttaccagag aacagtggag
     2881 actttgctgt aacctcccaa ccagtatatt caatagtgtg cttgaatatt gcatggattg
     2941 atgaatttct ttcttctgta cctataggta taaaatgaga ctgttacctt ttcataacgt
     3001 gggtctgaga tctgggccat gctatattta ctgttgtttt tctcagtagg gtcaccaaag
     3061 ctcctctaat aatgtttttc ctgggcatgt aaaaacgtct ataaactcac atttctcttc
     3121 tttagaaaaa tggtctgctt tggttctaac gtaggttgaa tggtcgttag tttttctctc
     3181 tccaggaaaa atctaacaga gcacattgtc agtcatatta gttccagaat gaagagtctt
     3241 tatttccttt catttcaaaa ctgtttctca tcttattcca actttcatgt catagaacct
     3301 tggcagtgaa ttgaaatatg gaccaaagcc acatgtactc actcagtaga agggatgtat
     3361 ttgactagtg caagcacaag aaaaagcaac agaaaccaag actacttgga atcatcagaa
     3421 cacagttctc tcatgatagc aaatactgga tatcccaaca cacccacata gcaagatttg
     3481 gatttaaaat cacatctcat gatga
//
