LOCUS       XM_006246951            3963 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosomal protein S6 kinase related
            (Rskr), transcript variant X1, mRNA.
ACCESSION   XM_006246951
VERSION     XM_006246951.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006246951.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006246951.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3963
                     /gene="Rskr"
                     /note="ribosomal protein S6 kinase related; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 4 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:120093092"
                     /db_xref="RGD:1596488"
     CDS             80..1294
                     /gene="Rskr"
                     /codon_start=1
                     /product="ribosomal protein S6 kinase-related protein
                     isoform X1"
                     /protein_id="XP_006247013.2"
                     /db_xref="GeneID:120093092"
                     /db_xref="RGD:1596488"
                     /translation="MGAVSCRQGQHTRVSAPQKGGNIQGHWARWKSLWCGMGTIRSGL
                     EELWELQRHQCLHQELLQPAPLLLEKPLSEWPVPQFISLFLPEFPMRPVKEQELKILG
                     LVAKGSFGTVLKVLDCAQNAVFAVKVVPKVKVLQRDTLRQCKEEVSIQRQINHPFVHS
                     LGDSWQGKRHLFIMCSYCSMDLYSLWSTVGCFPEDSVRLFAAELVLVLCYLHDLGIIH
                     RDVKMENILLDERGHLKVTDFGLSRRLSQGARAYTICGTLQYMAPEVLSGGPYNHTAD
                     WWSLGVLLFSLAAGKFPVAAERDHLTMLASVTHCGSEIPASINQELSLLLHELLCQNP
                     LYRLRYLHHFQAHPFFRGVAFDPELLQKQPVNFVMETQDTWPSPLENMSFEDFDCDLE
                     SLVHSISIDSLL"
ORIGIN      
        1 aatgcagcat cagagggagg aattgcttat gtaactggga cagcagattt agcagaagga
       61 aaggaggcag aggctgggga tgggagcagt gagctgtcga cagggacaac acacccgagt
      121 gtctgctcct caaaagggtg gcaacatcca gggtcactgg gctcgctgga agagcctctg
      181 gtgtggtatg gggaccatca ggtcaggtct ggaagaactg tgggaactac agaggcatca
      241 gtgcctacat caggagctcc tccagccagc cccattgctg ctagagaagc ctctgtctga
      301 atggccagtg cctcagttca tcagcctctt tctaccagag tttcccatgc ggcctgttaa
      361 agagcaggag ctgaagattt taggccttgt ggctaaaggt tcgtttggaa ctgtcctgaa
      421 agtgctagat tgtgcccaga atgctgtatt tgcagtgaag gtggtaccca aagtaaaagt
      481 tctacagcgg gataccctga ggcagtgcaa ggaggaggtt agcatccagc ggcagatcaa
      541 ccatcctttt gtacacagtt tgggggacag ctggcagggg aaacgacacc tctttattat
      601 gtgtagctac tgcagcatgg atctctactc cctgtggtcc actgttggtt gttttccaga
      661 ggattctgtc cgtctctttg cagctgaact ggtccttgta ctctgctatc tccatgactt
      721 gggcatcatc catcgtgatg taaagatgga gaatatcctg ctggatgaac gaggccatct
      781 gaaagttaca gactttggtc tgtctcgccg cctatcccag ggagcacggg cctatactat
      841 ctgtggcact cttcaataca tggctccaga ggtcttgagt ggtgggcctt acaaccacac
      901 tgctgactgg tggtccctgg gagtattgct tttctctctg gcagctggta agttcccagt
      961 ggctgcagag agagatcatt tgaccatgtt ggcaagtgtg acccactgtg gatctgagat
     1021 cccagcgtct attaatcagg agctctcact cctgctccat gagctcttat gccagaaccc
     1081 tctgtaccgt ctacgatacc tgcatcactt ccaggcccac cctttcttcc ggggtgtggc
     1141 ctttgaccct gagctcctac agaagcagcc agtgaacttt gtcatggaga cacaagatac
     1201 ctggcccagt ccattggaga acatgtcctt tgaggacttc gactgtgatc tcgagtcctt
     1261 ggtccattcc atctctattg actctctact gtagatggac accactcagt accaccaccg
     1321 tagtgatcca gtttttactt tgttcttcct tactatgtta ctgtaggtac tgggccagag
     1381 tttaaccttt ggcattttgc aattgatagc caaaatcgcc cctaatgctt tcccatcata
     1441 catcatacaa cccacctctc aactgtgggt caaggcatag accttcactt ctccaatact
     1501 tttacttgag ctgccggaca aagacttctt gaacttcatc cttgtttttt tttaaccata
     1561 cttcctttct tggacaacaa ggacactgtg tggactccca aggtgctatt tatatgtttt
     1621 aacaagttaa tcagatgcca ggaggtggtg gtgagtgtct ttaatcccgg cactggggag
     1681 gcagaggcag gtgggtctct gtgagtttga ggccaacctg gtctacagag ttacaggata
     1741 ctcagggata cacagagaaa ccctgtctcg gaaaaaaaaa aaaaaggatt attaaattga
     1801 tcgtttctcc caaacaactc aagattcaga gttggttttg tttttgtttt cacttctgaa
     1861 ctagaccagt agaggaccag ggatcagaaa ggaaaggaaa gtatgggatc gagccttgcc
     1921 caagctatat cttaagccac cccaaggcaa cttatcctat taagtatagc atcttgtata
     1981 caggaaaatg ggatagaatc atcagaaaac tgttttacag tggaccgaag tcagcagaaa
     2041 gctaaccaag caatgttgag caaaggggac acaaatgcat cacagaggag cacatggcag
     2101 tcttgggacc tttaggggga aagagttggt ttctcagtat aaagcagcag ctcccctggg
     2161 gcctggcccc agaccattat tggctctgct aagcagtcat tcctccacac atcagacctc
     2221 agggaaagcc ttaggttgga tcagcctggc tccccatccc agtacctttt aactgaggga
     2281 aacaggtttc agatttctca tgatgtaaat tgtttcttta aaatatttat ttgtacttac
     2341 tttatgtgta tgagtggttt gcctacacat gttaagtgta ctgtggtggt atctctggag
     2401 gccagaagaa ggtgctaggt cctctggtac tatagttata gatggttata aaccatgttt
     2461 ctattaaagt ggaactaaac catctctaga cgctcactca gctgcagaag attttgaacc
     2521 taacaccctc cactagccga gatgataggc ctgcaccaag cccagcttct atgatgctag
     2581 gcaagcattc taccaactga gtagcatcca cctttttgat gctctttcaa aggcagaggt
     2641 aattggcctg atggtacacc tgaatcccag cacctgggca taacagcagt ggtaaaagaa
     2701 tcctagttca aggctagcct aggctacatg ggcacaccta tatttcagaa aatctaagca
     2761 aaggccagcc aagacatcaa gacatcttaa cacaggtaaa gactctttca tcagctaaac
     2821 ctgatgattt gagtttgatc cctaaaacct gtataaacgg atgatatgac cactccaagg
     2881 aaggtttgat tttatttgag tctatgttgc cctggctgtc ccggaactca ctctgtagat
     2941 caggcagcct tggaactcag agatccacct gcctctgcct cctgagtgct ggggtcagag
     3001 gtgggctccg ccaccacaga caaaggaaag gaaggctttt attgtaggtg tgagagaagc
     3061 aggagcagaa acgagagagg gaggagagga aaaaggagga aagagagtga gagaaataaa
     3121 gacagcacag ctgaaagagc agagataaaa agcagctggg agagggacgc ccatgacctg
     3181 gaaacattta gagtaggagg ggatgtggga agagctgaga agagtttgta taccaacatg
     3241 gactcaggca tgtgtgacac tgaaggagcc tggatgccag catgcacttt ggtatattaa
     3301 cagggaccac agataccatt tgttccttcc agtgatgaaa ctggctccac aaattcctga
     3361 ggaatgctgg atttttctgt cagaacttgg caaaatggag tttcctttgg accttacaga
     3421 atctacatag tgaaggggag aatcagccct gcaagttctt ctcttacctt cacacatgca
     3481 tgtgtgttac atgtacacac acacacacac acacacacat gtatatgggt ggggttgagg
     3541 atatgaaatc ctgggtttga tccaagtgtg gtgtcaaaat cctataatcc caacacttgg
     3601 gaggtgaagg taggggagta agaaattcag ggtaggggtt ggggatttag ctcagtggta
     3661 gagtgcttgc ctagcaagca caaggccctg ggttccccag ctccggaaaa aaaaaaaaaa
     3721 ttcagggtag ctacataggt tgagcacagc ttcaactcac tgtgaaaccc taacacactc
     3781 atacacacaa agtaaaaaca aaataaggac aaaggtagta gactttgtga cattgagaac
     3841 ctagtccaat gttaatatta atccatttga tcacagttgt acaatgaatt aaaccctgag
     3901 gaaatggtga gcatgtcccc aggtttcttt tgttggtcgt attaaacagc ttagagacaa
     3961 tca
//
