LOCUS       NM_001191710            6739 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus round spermatid basic protein 1 (Rsbn1), mRNA.
ACCESSION   NM_001191710 XM_227540
VERSION     NM_001191710.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6739)
  AUTHORS   Takahashi,T., Tanaka,H., Iguchi,N., Kitamura,K., Chen,Y.,
            Maekawa,M., Nishimura,H., Ohta,H., Miyagawa,Y., Matsumiya,K.,
            Okuyama,A. and Nishimune,Y.
  TITLE     Rosbin: a novel homeobox-like protein gene expressed exclusively in
            round spermatids
  JOURNAL   Biol Reprod 70 (5), 1485-1492 (2004)
   PUBMED   14724137
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jul 17, 2010 this sequence version replaced XM_227540.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.419632.1,
                                           SRR26360186.965841.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1038              JAXUCZ010000002.1  194105061-194106098
            1039-1712           JAXUCZ010000002.1  194119245-194119918
            1713-1850           JAXUCZ010000002.1  194146953-194147090
            1851-1993           JAXUCZ010000002.1  194147423-194147565
            1994-2161           JAXUCZ010000002.1  194152185-194152352
            2162-2270           JAXUCZ010000002.1  194154010-194154118
            2271-6739           JAXUCZ010000002.1  194154674-194159142
FEATURES             Location/Qualifiers
     source          1..6739
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..6739
                     /gene="Rsbn1"
                     /gene_synonym="RGD1307231"
                     /note="round spermatid basic protein 1"
                     /db_xref="GeneID:310749"
                     /db_xref="RGD:1307231"
     exon            1..1038
                     /gene="Rsbn1"
                     /gene_synonym="RGD1307231"
                     /inference="alignment:Splign:2.1.0"
     CDS             336..2723
                     /gene="Rsbn1"
                     /gene_synonym="RGD1307231"
                     /note="rosbin, round spermatid basic protein 1"
                     /codon_start=1
                     /product="lysine-specific demethylase 9"
                     /protein_id="NP_001178639.1"
                     /db_xref="GeneID:310749"
                     /db_xref="RGD:1307231"
                     /translation="MFRSTRTTDQWRAGERLQCPAGHARAALARTADGGAVGPFKCVF
                     VGEMAAQVGAVRVVRAVAAQEEPDKEGKEKPHVGVSPRGVKRQRRVSSGGSQEKRGRP
                     SQDPPLAPPHRRRRSRQHPGPLPPTNAAPTVPGPVEPLLLPPPPPPSLAPAGPAVAAP
                     LPAPGTSALFTFSPLTVSAAGPKHKGHKERHKHHHHRGSDGDPVACVPGDLKHKDKQE
                     NGERSGGVPLMKAPKRETADENGKTQRADDFVLKKIKKKKKKKHREDMRGRRLKMYNK
                     EVQTVCAGLTRISKEILTQGQLNSTSGVNKESFRYLKDEQLCRLNLGMQEYRVPQGVQ
                     TPFTTHQEHSIRRNFLKTGTKFSNFIHEEHQSNGGALVLHAYMDELSFLSPMEMERFS
                     EEFLALTFSENEKNAAYYALAIVHGAAAYLPDFLDYFAFNFPNTPVKMEILGKKDIET
                     TTISNFHTQVNRTYCCGTYRAGPMRQISLVGAVDEEVGDYFPEFLDMLEESPFLKMTL
                     PWGTLSSLQLQCRSQSDDGPIMWVRPGEQMIPTADMPKSPFKRRRSMNEIKNLQYLPR
                     TSEPREVLFEDRTRAHADHVGQGFDWQSTAAVGVLKAVQFGEWSDQPRITKDVICFHA
                     EDFTDVVQRLQLDLHEPPVSQCVQWVDEAKLNQMRREGIRYARIQLCDNDIYFIPRNV
                     IHQFKTVSAVCSLAWHIRLKQYHPVVETAQNTESNSNMDCGLEVDSQCVRIKTESEER
                     CTEMQLLTTASSSFPLPSELHLQDLKTQPIPVFKVESRLDSDQQHSLQAHPSTPV"
     exon            1039..1712
                     /gene="Rsbn1"
                     /gene_synonym="RGD1307231"
                     /inference="alignment:Splign:2.1.0"
     exon            1713..1850
                     /gene="Rsbn1"
                     /gene_synonym="RGD1307231"
                     /inference="alignment:Splign:2.1.0"
     exon            1851..1993
                     /gene="Rsbn1"
                     /gene_synonym="RGD1307231"
                     /inference="alignment:Splign:2.1.0"
     exon            1994..2161
                     /gene="Rsbn1"
                     /gene_synonym="RGD1307231"
                     /inference="alignment:Splign:2.1.0"
     exon            2162..2270
                     /gene="Rsbn1"
                     /gene_synonym="RGD1307231"
                     /inference="alignment:Splign:2.1.0"
     exon            2271..6739
                     /gene="Rsbn1"
                     /gene_synonym="RGD1307231"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctccgggta agatgaagga ggaacactgg aagtggagcg tctgaacaca ccaccagact
       61 ctgaaagcta ttaacattgt ttgggccgtt agggcggttg gcggcaactc gccggcgggc
      121 ggcagttgcg tcgcaccccg aagcgtgcct tggcgcacgc tcccctccgc tcctccactc
      181 agagagcggg gtgggggagc gggggagggg gggcggggaa acccagaggg cgctggaact
      241 acaactcccg caaggctttg cgcgcccagg gtgccttaca atagaagctc ggttggcgag
      301 gtctgcggag aggtgccgga actgccgttt ccggcatgtt caggtctacg agaacgaccg
      361 atcagtggag ggcgggggag agactccaat gcccagcggg ccatgcgcgg gcggcgcttg
      421 cgcgaaccgc ggacgggggg gcggtcgggc catttaaatg tgtgtttgtg ggtgaaatgg
      481 ctgcgcaggt cggagcggtt cgcgtagtac gggcggtggc ggcgcaggag gagccggaca
      541 aagaggggaa ggagaaaccc catgttgggg tttcgccgcg gggagtgaag cggcagcgcc
      601 gggtgagcag cgggggttct caggagaagc gggggcggcc gagccaggac ccccctctcg
      661 ctccccctca tcggcggcgt cgtagccgcc aacatcccgg gccgctgcct ccaacgaatg
      721 ccgccccaac cgtcccgggc cctgttgaac ctctgctcct gccgccgccg ccgcctccgt
      781 cgctggcacc ggccgggccc gctgtcgctg ccccgctccc ggccccaggc acctcggccc
      841 tcttcacctt ctcgcccctg acggtgagcg cggccgggcc caagcataag ggccacaagg
      901 agaggcacaa gcaccatcac caccgcggct ccgatggtga ccccgtcgcc tgcgttccgg
      961 gcgatctcaa gcacaaggac aagcaggaaa acggcgagag gagcggaggg gtgcctctga
     1021 tgaaggcccc caagagagaa acagcagatg aaaatggtaa aacccagaga gctgatgatt
     1081 ttgtcttgaa gaaaataaag aagaaaaaga aaaagaaaca ccgagaagac atgagaggaa
     1141 gacgccttaa aatgtacaat aaggaagtac aaaccgtctg tgctggcctg acccgcatca
     1201 gcaaagaaat tctcacccaa ggacagctaa atagcacttc aggagttaat aaggagtcct
     1261 tcaggtattt gaaggatgaa cagctgtgca gattaaattt gggcatgcaa gaatatcggg
     1321 tgccccaggg agtacagaca ccttttacaa cgcaccaaga acattctatt cgcagaaatt
     1381 tcttaaaaac aggtactaaa tttagcaact ttattcatga agaacaccag tccaatggtg
     1441 gtgctcttgt ccttcatgca tacatggacg aactctcatt tttgtctcca atggagatgg
     1501 agagattttc tgaggagttt cttgctttga cattcagtga aaatgagaaa aatgctgcat
     1561 actatgcttt agcaatagtg catggagcgg ctgcttatct cccagacttc ctggactact
     1621 ttgcttttaa ttttcccaac actccagtga aaatggaaat tttgggcaag aaagatattg
     1681 aaacaaccac catttcaaat tttcatactc aggtcaacag gacatattgc tgtggtacct
     1741 accgagcagg tcctatgcga cagataagtc ttgttggagc agtagatgaa gaagttggtg
     1801 attatttccc agagttccta gatatgttag aagaatcacc atttctgaaa atgactttgc
     1861 cctggggtac actttccagc ctccaactac aatgtaggtc tcagagtgat gatgggccta
     1921 taatgtgggt gaggccagga gagcagatga tccctacagc agatatgcca aagtcaccct
     1981 tcaaaagacg acgatcaatg aatgaaatta aaaatctcca gtacctacct cggacaagtg
     2041 aaccccgaga agtcctcttt gaagatagga caagagctca tgctgatcat gtaggtcagg
     2101 ggtttgactg gcagagtacg gctgctgttg gggttttgaa ggctgtacaa tttggtgaat
     2161 ggagcgatca gcctcgcata accaaagatg tgatttgttt tcatgctgag gattttactg
     2221 atgttgtaca gagacttcag ttggaccttc acgaacctcc agtttcccag tgtgttcagt
     2281 gggtggatga agcaaaacta aaccaaatga ggcgagaagg cattcgctat gctagaattc
     2341 agctttgtga caatgatatc tacttcatcc ctagaaatgt cattcatcag ttcaaaacag
     2401 tgtcagcagt gtgcagctta gcctggcata taaggcttaa acaataccac cctgttgtgg
     2461 aaaccgctca aaacacagag agcaattcca acatggactg tggtttagaa gttgactccc
     2521 agtgtgtgag aataaaaact gaatctgagg agagatgcac agagatgcag cttttgacaa
     2581 ctgcttcatc gtctttccca cttccatcag aacttcatct acaggatctg aagacccagc
     2641 ctattccagt gttcaaggtg gagagcagac tggactctga ccaacaacac agtctgcagg
     2701 cacatccaag cactcctgtg tgattatgta catattcaaa cacatttttt aactttttta
     2761 aattttgatg tgaagttata gttttataac tggcttaagt taagttttat tggagaaatc
     2821 ttgcctataa ttctataaag agaaatgaca ttccacaaat gtcaagcata tcttttttac
     2881 acagattatg caaagctaag agttgtatct tatcccgtta gtacagtatg taatagtggg
     2941 tctgctgcta ctttctgttt taaggtgtga ggttacaatt caatctcttc ttcaaatcag
     3001 aacaagaatt ctctggaata gcaggttctt acttggtaaa gtatttactt cccttgattc
     3061 tatctttctt gtctcttgcc atacttgttt atgtggcaga aagcagattt atggtttagt
     3121 acttgtgtct tcatggcact ccattagttt ccactgtaaa atggtattgg tttcaggaaa
     3181 ggctcctgca tctggtacgt ggacaagtga gttgcttaat tctaaccaca aagaagacat
     3241 ggtctctaaa gaaaactggt ttttagcaaa agaggaagca cagcactttc ggatccaggc
     3301 cgcctttttg tgtctgttat ttaaaaccca gtggatattt caattaaaca aaactctaaa
     3361 gatgacaaac aaaaatctaa agattggcca ttcattatcc atggttcatc ttttctagga
     3421 tatatggtaa ctatactggc tattttgagc aaaagagata atgttgacct gttctgcttc
     3481 ctagtatcct catatcaaag ttagagaatt gcatcagtct tactgatgag ggctgccaca
     3541 gctgagcatc aaacttagga gcaactattc ttgtgacttg gcatctactt ttgaaacaat
     3601 ttacagtttt atctggctga tacctgggtt tgttcacagt tattccatgt tgctgttttc
     3661 tagtaacagg cattagactt ccatcctaga gtttcaggta ggctgaaact tagtgtctgg
     3721 atatttattt tgttttccct tcttcaaaca ggcctccttc atccaagtag tgtggtctct
     3781 tactttgtaa tgttcatgtg ctatgcctta tactttctct tagttaacaa ctcagtaggc
     3841 cttttgttta ctaaaggaag agtactctcc acacctaaga ccagattctt gtatctacct
     3901 ggttacagtg caatttgatt tttttttttc ctggatggtg agatttgaaa tatttgcatt
     3961 aacataggca aaagaaaaag atgctgcttt attatgtctg tcaccatgga aacttagctg
     4021 catctttgga aatatcaaat atgaattttc tctaaaatat tctgaaatag gttaaatctt
     4081 atataaatat tactttgtgc aatattgttg tgtagttaaa tgcatattag caaagtatag
     4141 aggtcactgt gtaaaccgat agaaaagtaa ccatcagcaa atactacagt gattagttag
     4201 aatctgtatt attccttata tatatgtata tgtatgtatt ctctgttaca aaggatgaag
     4261 acaaataaat agggaaacac tccaatgtaa accatttatg aattggaagt gatgttgctt
     4321 ttagttatct ttgtaaataa ggtaattaga atggtatgaa aggtaatgtg attattacag
     4381 gggtgttttt aaatcctgtg tataaattct agggtaaatt ctagtttatc aaactagttt
     4441 ttaagggacc tttgagggta tttttgttat tttgtggaga aaaggggtat atcacaaaac
     4501 gaatgggttt gggttatttc ttatttttat ttttttctgt ccagaagaat ttcataaagc
     4561 tttaccaggc tgtgcaaaga aaaattcttc tcaggcaaca tttgctttta aaaataatca
     4621 tgaagagaaa aagttgttaa cgcaaaaagt tttattttgt ttttcttgtc ttccaagatc
     4681 cgatttcccc atctcccact tgccatccag cagatgccat cctgtcatct aagctggtca
     4741 ttactaataa acaaggagac tgtctcctga cagccagcac tgtgtaatca ctcaggaacc
     4801 agcggatctg caaagaccta caatcaaacg caaatctcca ttttcctttt acaaaacatt
     4861 ctaccctcac ctccagtata aacatattaa aagaatataa aaatgttgaa aatcatgtac
     4921 taatgaagtc attgtatatt agattgcaat agaatggaaa gaaacattta gctagtaatg
     4981 tatctggaaa ccctgaatgt cctatgtgag tattagattt tgatagcatg ctttaaagac
     5041 tgatgaatat aaaagcagaa gctttgagtt tcttgctgct ttcaaaacta tgtcctagtt
     5101 gagtgataca aatgatggca acttttctaa atcattaaac tatctggttg gtggggtgag
     5161 gcatgcaaca gcctggcatc ctctggtttg taaagtagtg gtggcagaga agttgtaact
     5221 gcagtggaag ctgatcttcc tttctggtat gttatctgtt gtgccaaccc ttgagattac
     5281 ttgcagaatg tggctataca ttttagtact ttgtggatca gagggatatt ttaaaaatat
     5341 gctaatcgaa aggacctaat aaattaatat tcctagcagc aaatagaatg atttttatgg
     5401 taactgttaa aaggataaat gtcttcccct gccccagagg tcattctata ataatcagga
     5461 taggatagga gttagggtta cgattctgag aggtgtccca aattcataaa gcaataataa
     5521 cctgtatatt ggttccctct tccaaagttt aactcttgaa aaatgaactc ttaggcttaa
     5581 ttgtactttg cttattcagt acttacaaat tttactggta cattattttt attgtaagac
     5641 ttttggaaag tgccctgtac cctcagaaac agttggacta tcagttcaca aatactacaa
     5701 gctcttgtat ggggaaagga gcttatttga aatcatttgc taaactttag gaaacaatgt
     5761 atcagtctta acaggcataa agatctcacc taatgacttg agaaactttt gcttattgct
     5821 tccccccctg tataaatatt gtctagaagg aaagttaata taggaacaag actccaaaat
     5881 ccacaaaaat atgttcctag tgaatatatc ctttatcatt aatattagcc cattattttt
     5941 tcatctgtat ttgcctttta aatttatttg catcattaag gataattaga attactgagt
     6001 ttgtttttct aataaatcag ttccatcctt tcagtagcac atgccagagg ttcacatttg
     6061 tgctaagttt catgttttca agacagtctg tagccgtact tactggtcat gcaagtagga
     6121 gatacacaac accagtgttt ttcttaagtg cataaaggac ttatcctcat cctgaaagtc
     6181 tgttgcttta aaagcaagta tccataatta ttatggcctt ccatttaaaa aatcttcata
     6241 aattttttag gatccacttg tgcatgtagt tgagaccagt gtctcttaaa atatagcact
     6301 tttcaattct ctctgaagaa atacttatgt actactatca cacgttgtaa attttcatgt
     6361 aatagtgttt tctgtgacta aacttcattt tgattggcag ctaagacttt ttttcctgtg
     6421 gctttaattt atctaagagg tctttgcata tagaaatgtt taatttgcct ggcggactat
     6481 ttgcgtttgt gtggccttag tttgtttatt gacattaaca agtgtttaaa aaggttttta
     6541 atgaatagtc ttaaatctaa atttgtgtga ataataattc ttttaacaca gtgctttttg
     6601 tagctgtctg agtgtgttaa attgttaagc tatttctttg taaagtagga caatggaatg
     6661 cataggtttt ttttttttcc tgtaaagtat ttttttaata aacaaagtct gatttgtcct
     6721 ttactgatgt ttcaaaatg
//
