LOCUS       NM_001271211            2067 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus radical S-adenosyl methionine domain containing 1
            (Rsad1), mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001271211 XM_001081294 XM_003750909 XM_039086837
VERSION     NM_001271211.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Pagliarini,D.J., Calvo,S.E., Chang,B., Sheth,S.A., Vafai,S.B.,
            Ong,S.E., Walford,G.A., Sugiana,C., Boneh,A., Chen,W.K., Hill,D.E.,
            Vidal,M., Evans,J.G., Thorburn,D.R., Carr,S.A. and Mootha,V.K.
  TITLE     A mitochondrial protein compendium elucidates complex I disease
            biology
  JOURNAL   Cell 134 (1), 112-123 (2008)
   PUBMED   18614015
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On or before Apr 16, 2021 this sequence version replaced
            XM_039086837.1, NM_001271211.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643291.29049.1,
                                           SRR26643290.36758.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-222               JAXUCZ010000010.1  79996226-79996447   c
            223-356             JAXUCZ010000010.1  79995706-79995839   c
            357-561             JAXUCZ010000010.1  79995397-79995601   c
            562-927             JAXUCZ010000010.1  79991971-79992336   c
            928-991             JAXUCZ010000010.1  79991664-79991727   c
            992-1139            JAXUCZ010000010.1  79991106-79991253   c
            1140-1194           JAXUCZ010000010.1  79990849-79990903   c
            1195-1298           JAXUCZ010000010.1  79989840-79989943   c
            1299-2067           JAXUCZ010000010.1  79988838-79989606   c
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..2067
                     /gene="Rsad1"
                     /note="radical S-adenosyl methionine domain containing 1"
                     /db_xref="GeneID:688146"
                     /db_xref="RGD:1592414"
     exon            1..222
                     /gene="Rsad1"
                     /inference="alignment:Splign:2.1.0"
     CDS             88..1416
                     /gene="Rsad1"
                     /note="gene_id=rCG34912.0 transcript_id=rCT34912.0
                     protein_id=rCP45017.0"
                     /codon_start=1
                     /product="radical S-adenosyl methionine domain-containing
                     protein 1, mitochondrial"
                     /protein_id="NP_001258140.1"
                     /db_xref="GeneID:688146"
                     /db_xref="RGD:1592414"
                     /translation="MVPSGVRTGRWVAAARAAQRRPRVDSLGQPPSPESARTRAALYV
                     HWPYCEKRCSYCNFNKYIPRGVDEGAVRNCLVTEARTLLRLSGVQRVESVFFGGGTPS
                     LASPHTVAAILEAVAQEVYLPADSEVTLEANPTSAPGPRLAAFGAAGVNRLSIGLQSL
                     DDAELQLLGRTHSAREALQTLTEARHLFPGRVSVDLMLGLPAQKVKPWLQQLQKLLRH
                     CDDHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAAEMYQEGRTVLRDAGFRQYEVSN
                     FARNGALSNHNWTYWQCGQYLGIGPGAHGQFVPQGAGGHTREARIQTLEPDNWMKEVM
                     LFGHGTRKCVPLSELELLEEVLAMGLRTDVGVTHQHWRQFEPQLTLWDVFGASREVKE
                     LLEQGLLLLDHRGLRCSWEGLAVLDSLLLTLLPQLQEAWQHRTPSPESGG"
     exon            223..356
                     /gene="Rsad1"
                     /inference="alignment:Splign:2.1.0"
     exon            357..561
                     /gene="Rsad1"
                     /inference="alignment:Splign:2.1.0"
     exon            562..927
                     /gene="Rsad1"
                     /inference="alignment:Splign:2.1.0"
     exon            928..991
                     /gene="Rsad1"
                     /inference="alignment:Splign:2.1.0"
     exon            992..1139
                     /gene="Rsad1"
                     /inference="alignment:Splign:2.1.0"
     exon            1140..1194
                     /gene="Rsad1"
                     /inference="alignment:Splign:2.1.0"
     exon            1195..1298
                     /gene="Rsad1"
                     /inference="alignment:Splign:2.1.0"
     exon            1299..2067
                     /gene="Rsad1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcccacg cggtccagca cggggcacac ccttgctggg cgcgctgtcg aggtctcgca
       61 tccctactgt ctgccgcctt gcacgtcatg gttccctccg gggtccggac cggtagatgg
      121 gtagcagcgg ccagggcggc ccagaggcgc ccccgcgtgg atagcctggg acagcctccg
      181 agtcctgagt ccgcgagaac gcgcgcggcg ctttacgtgc actggcctta ttgcgagaaa
      241 cgctgcagct actgcaactt caataagtac atcccccgcg gcgtggacga gggggctgtg
      301 cggaattgcc tggtgactga ggcaaggacg ctgctgcggc tcagcggggt gcagagggtg
      361 gagtctgtgt tctttggtgg gggaaccccg agtctggcca gtccccacac tgtagctgct
      421 atcctggagg ccgtggcaca ggaagtctac ctgcctgcag attcggaagt cacgttggag
      481 gccaacccca cttcagcccc aggtcccagg ctggcagctt ttggagcagc aggagtgaac
      541 aggttgtcca ttggtttaca gtccctggat gacgcggaac tgcagctgct gggccggact
      601 cactcagccc gagaagcttt gcagaccctg acggaggcca ggcacctttt ccctggcaga
      661 gtgtcggtgg atttgatgct ggggttaccg gcacaaaagg tgaagccatg gcttcaacag
      721 cttcagaaac tgctgcgcca ctgtgacgac cacctctctc tctaccagct gaccctggaa
      781 cggggcacct cactctttgc ccaggtgcag cagggtaccc tcccggcccc cgacccggac
      841 ttggctgctg agatgtacca ggagggcagg acagtccttc gtgatgctgg ctttcgccag
      901 tatgaggtct ccaactttgc acggaatgga gcgctcagta atcacaactg gacgtactgg
      961 cagtgcggtc agtaccttgg cattgggcct ggagcccatg gacaatttgt gcctcaggga
     1021 gctggaggcc atacccggga agcacggatc cagacactgg agcctgacaa ctggatgaaa
     1081 gaggtgatgc tctttggtca tggcacccgg aagtgcgtcc ccctgagcga gctggagctg
     1141 ctggaggagg ttttggctat ggggctgcgc actgatgtgg gggtcactca ccagcattgg
     1201 cggcagtttg agccccagct gaccctgtgg gacgtgtttg gagcaagcag ggaggtgaag
     1261 gagctgctcg aacagggttt gttgctgctg gaccacaggg gtctccggtg ttcctgggag
     1321 ggtctagctg tgttggactc cttgttattg accctcctgc ctcaactcca agaggcctgg
     1381 cagcacagga ctccctcacc tgagtcagga ggatgaccag acattcctgt atcaagggac
     1441 aacaccagtg gactcggagg gctggaccag catggtggca tcagcctgta ggtgccgtct
     1501 ctgctttgag gtgttactgc ttgcttctgt cacgccatgg ggatagattc ggtcagttgg
     1561 gtggaaggct atctgttctg ggtaccggta ttcctcacgg catcccagga gtcacggact
     1621 gtgtgttccc tgactaggat gtacttacca ccacccccac tggcttttgt cggctttttt
     1681 ggacaccaaa taacagaaaa tctttctaca ggggattgta cctatccccc attctagagc
     1741 aaagccctga gttagcttct atgattcagt agaactaaat cccctccaga tctcttaaac
     1801 aagaggaaac ataggaacaa gatgtttaca gaaccatttg agggactgga gagatagctc
     1861 agtggtgaga acactgtttg ctcttcagca gaaccagggt tcaatttcca gcagccatgt
     1921 ggcagctcac agccatctgt aactcccatt ccagaggatc tggtgccctc ttttgacctc
     1981 tgtgtgtaac agacacatat gtggtgcatg gctattcatc caggcaaaca cacatacaat
     2041 aaaaaataaa ttaaagaaag attctta
//
