LOCUS       XM_230637               5157 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosome binding protein 1 (Rrbp1),
            transcript variant X3, mRNA.
ACCESSION   XM_230637
VERSION     XM_230637.10
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 31, 2024 this sequence was replaced by
            NM_001427599.1.
            
            On Jan 21, 2021 this sequence version replaced XM_230637.9.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5157
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5157
                     /gene="Rrbp1"
                     /note="ribosome binding protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 79 ESTs, 9 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 204 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:311483"
                     /db_xref="RGD:1306536"
     CDS             295..4656
                     /gene="Rrbp1"
                     /codon_start=1
                     /product="ribosome-binding protein 1 isoform X3"
                     /protein_id="XP_230637.6"
                     /db_xref="GeneID:311483"
                     /db_xref="RGD:1306536"
                     /translation="MDIYDTQTLGVVVFGGFMVVSAIGIFLVSTFSMKETSYEEALAN
                     QRKEMAKTHHQKGEKKKKEKTVEKKGKTKKKEEKPNGKIPEHDLDPNVTIILKEPMRV
                     PAVAVAPTSVHSSVGRTPVATVPAMPQEKLASSPKDKKKKEKKVAKVEPAVSSIVNSI
                     QVLASKSAILEASPKEVPMVAVPPVGSKASAPATSSQGKKGQGAQNQAKKGEGAQNQA
                     KKGEGVQNQAKKGEGAQNQVKKGEGAQNQAKKGEGAQNQAKKGEGTQNQAKKGEGAQN
                     QGKKGEGAQNQAKKGEGAQNQAKKGEGAQNQAKKGEGAQNQAKKGEGGQNQAKKGEGA
                     QNQAKKGEGAQNQAKKGEGVQNQAKKGVEGAQNQGKKGEANQNQAKKGEGGQNQTKKG
                     EGLQNQGKKGEATQKQDKKIEGAQNQGKKPEGTPNQGKKGEGAQNQGKKGEGAQNQGK
                     KGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQ
                     GKKGEGSPSQNIKVEGMQNQGRKAEGTPAQGKKMEAAQNQGKKAEGVQSQGKKGEGSQ
                     NQGKKGDGNPNQGKKGEGAPNQNRKTDTVANQGTKTEGVSNQVKKSEGSPNQGKKAEG
                     APNQGKKVEGSPNQAKKVDAAAGQGKKSEMTPAQGKNASMVQSQEAPKQEAPAKKKSK
                     KKGEPGPPDCDSPLFLPYKTLVSTVGSMVFSEGEAQRLIEILSEKTGVIQDTWHKATQ
                     KGDPVAVLKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQL
                     VAREQEIAAVQARMQASYQDHVKEVQQLQGKIRTLQEQLENGPNTQLARLQQENSILR
                     DALNQATSQVESKQNTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEK
                     QILQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKL
                     QSSEVEVKSKCEELSDLHGQLKEARAENSQLTERIRSIEALLEAGQAQDSQASRAEAD
                     QQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEK
                     LRSLTQAKEESEKQLHLAEAQTKEVLLALLPELSIPAHQNYADWLQEVKEKGSELLKK
                     PPVSVEPSLDIVSKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVWK
                     AKVGAAEEELQKSRFTVKHLEDLVEKLRGELESSDQVREHTSHLEAELEKHMAAASAE
                     CQNYAKEVAGLRQLLLDSQSQLEEAKSEAQKQSNELALVRQQLSDMRSHVEDGDVAGS
                     PAVPPAEQDPVKLKTQLERTEATLEDEQTRRQKLTAEFEEAQSTACRLQEELEKLRAA
                     GPLESSGIEEVTQLKERLEKEKRLTSDLGRAATKLQELLKTTQEQLTKEKDTVKKLQE
                     QLGKAEDGSSSKEGTSV"
ORIGIN      
        1 gcccgggtgg ggaaggcagg aggcggcgat cccggcggag ggggccgttc gccagctccg
       61 aggcagaaag tgccacgact ccacacgcgc gcacgcagcc agcgagcggc cggagcggac
      121 ggcggacggg gcggacggcg ctggggtcgc ggtttgtgca gctgcttagg ggcggcttct
      181 cggtggaggc tcggccggct cctctctcgc ggttccgagg cggcggcggc tgctcttgcc
      241 ctctcgctct ccctctcgcg tctcccgctg caggtggaaa gcaagccagc caagatggat
      301 atctacgaca ctcagacctt gggggttgtg gtctttggcg ggtttatggt tgtttctgcc
      361 atcggcatct tcctggtgtc aaccttctcc atgaaggaga cgtcatatga agaagccctt
      421 gccaaccagc gcaaggagat ggcaaaaact caccaccaga aaggagagaa gaaaaagaag
      481 gagaaaaccg tggagaagaa aggaaagacc aagaaaaagg aagagaagcc taatgggaag
      541 atacctgaac acgacctgga tcccaatgtg accatcatcc tcaaggaacc aatgcgcgta
      601 ccagctgtgg ctgtggctcc aacttcagtc cattcctctg tgggccgtac ccctgtagcc
      661 actgtaccag ccatgcctca ggaaaagctg gcttcctccc ctaaggacaa aaagaagaag
      721 gagaaaaaag tggcaaaggt ggagccagca gtcagttcta ttgtgaattc catccaggtt
      781 cttgcttcaa agtctgccat cttggaagcc tcacccaaag aggtgcctat ggtggctgtg
      841 ccccccgtgg gctctaaggc cagtgctcct gccaccagca gtcagggcaa gaaggggcag
      901 ggagcccaga accaggctaa gaagggggag ggagcccaga accaagctaa gaagggggag
      961 ggggtccaga accaagctaa gaagggagag ggggcccaga atcaagttaa gaaaggagag
     1021 ggtgcccaga accaggccaa gaagggggag ggggcccaga accaagctaa gaagggggag
     1081 gggactcaga accaggccaa gaagggggag ggagcccaga accaaggtaa gaagggagaa
     1141 ggggcccaga accaggctaa gaagggggag ggggcccaga accaggctaa gaagggagag
     1201 ggggcccaga accaggccaa gaagggagag ggggctcaga accaggccaa gaagggcgaa
     1261 gggggccaaa accaggccaa gaagggagag ggggctcaga accaggccaa gaagggggag
     1321 ggggcccaga accaagctaa gaaaggtgag ggggtccaga accaggccaa gaaaggggta
     1381 gaaggggccc aaaatcaggg caaaaagggg gaggcaaacc aaaaccaggc caagaagggg
     1441 gagggaggcc agaatcaaac taagaagggg gaaggactcc agaaccaagg caagaaggga
     1501 gaagcaactc aaaaacagga caaaaaaata gaaggagccc agaatcaagg caagaagcca
     1561 gagggaaccc caaaccaagg caagaaggga gagggggccc agaaccaagg caagaaggga
     1621 gagggggccc agaaccaagg caagaaagga gagggggccc agaaccaggg caagaaagga
     1681 gagggggccc agaaccaggg caagaaagga gagggggccc agaaccaggg caagaaagga
     1741 gagggggccc agaaccaggg caagaaagga gagggggccc agaaccaggg caagaaagga
     1801 gagggggccc agaaccaggg caagaaaggg gaagggtctc ctagccagaa tataaaagta
     1861 gagggtatgc aaaaccaggg cagaaaagca gaaggaaccc cagctcaggg caagaaaatg
     1921 gaggcggccc agaaccaggg taaaaaggca gagggggttc aaagtcaggg caagaaaggg
     1981 gaagggtccc agaatcaggg caaaaagggg gatggaaatc ccaaccaagg caagaagggg
     2041 gagggggctc ccaaccagaa cagaaagaca gatacagttg ctaatcaggg cacaaagaca
     2101 gagggtgtct caaaccaggt gaaaaagtca gaggggtccc ccaatcaggg aaaaaaggca
     2161 gagggagccc caaatcaagg caaaaaggta gaaggatccc ccaaccaggc caaaaaagtg
     2221 gatgcagctg ccggtcaggg taaaaagtcg gagatgactc ctgctcaggg taaaaatgca
     2281 agcatggtcc agagccagga ggcaccaaag caagaggcac ctgcaaagaa gaagtcaaag
     2341 aaaaaaggag agcctgggcc cccagattgc gacagccctc ttttcctgcc ctacaagaca
     2401 ctggtctcca cagttggaag catggtgttc agtgagggcg aggcccagcg gcttattgag
     2461 atcctctctg agaagactgg agtcattcaa gacacctggc ataaggccac tcagaagggt
     2521 gaccctgtag cagttctgaa gcgccaacta gaagagaaag aaaagctgct ggccacagag
     2581 caagaggatg cagctgtcgc caagagcaaa ctaagagaac tcaacaagga gatggcttca
     2641 gagaaggcca aggctgcggc tggggaggcc aaggtgaaga agcagctggt agcccgggaa
     2701 caggagattg cagctgtgca ggcgcggatg caggccagct atcaggacca tgtgaaggag
     2761 gtgcaacagc tgcagggcaa gatccggact cttcaggaac agctggagaa tggtcctaac
     2821 actcagctgg cccgcctaca gcaggagaac tccatcttga gggatgcctt gaatcaggct
     2881 accagccagg tggaaagcaa gcagaacaca gaactggcaa agctccgaca ggaactcagc
     2941 aaggtcaaca aggagctagt ggaaaagtca gaggcctccc ggcaggagga acaacaacgg
     3001 aaggctctgg aagccaaggc agccaccttt gagaagcaga ttctacagct gcaggcgtcc
     3061 cacaaagaga gtgaagaggc tctgcagaag cgcctggagg aggtcacccg ggagctatgc
     3121 cgggcacaga cgagccatgc caacctccga gcggatgctg agaaggctca ggaacagcag
     3181 cagcgagtgg cagagttgca cagcaaatta cagtcctcgg aggtggaggt aaaaagcaag
     3241 tgtgaggagc tgagtgatct ccatgggcag ctcaaggagg ccagggcgga gaactcacag
     3301 ctcacagaga ggatccgttc tatcgaggcc cttctggaag caggccaggc ccaagactcc
     3361 caggccagcc gagctgaggc cgaccagcag cagacccgtc tcaaggaact ggaatcacag
     3421 gtgtcgtgtc tggagaagga gaccagtgag ctcaaggagg ctatggagca acagaaaggg
     3481 aagaacaatg acctccggga aaagaactgg aaggccatgg aggccctggc cttagctgag
     3541 cgggcgtgtg aggaaaagct gcgctccctg acccaggcca aggaggaatc agaaaagcag
     3601 ctacatctgg ctgaggccca gaccaaggag gtcctactgg ccttgctccc ggagctctct
     3661 atcccagctc accagaatta tgctgactgg ctacaggaag tcaaagagaa gggctctgag
     3721 ctgctgaaga agccacctgt ttccgtagag ccctccttgg acatagtctc aaagttgagg
     3781 gaagctgagg agacccagaa ctctttgcag gctgagtgtg accagtaccg caccatcctg
     3841 gcagagacgg agggtatgct caaagacctg caaaagagtg tggaggaaga agagcgtgtg
     3901 tggaaagcca aggtgggagc tgccgaagag gagctccaga agtcacggtt tacagtgaaa
     3961 catctagaag accttgtgga gaagctaaga ggagaacttg aaagctcaga tcaggtgagg
     4021 gagcacactt cccatctgga agcggagctg gagaagcaca tggcagctgc cagtgcagag
     4081 tgtcagaatt atgccaagga ggtggcaggg ttgaggcagc ttctgctaga ctctcagtct
     4141 cagctggagg aagccaagag tgaagcccag aaacaaagca atgagcttgc tctggtcagg
     4201 cagcagttga gtgacatgag gagccacgta gaggatggtg acgtggctgg gtctccagct
     4261 gtccctccag ccgagcagga ccctgtgaag ttgaaaacac agctggagcg gacagaagcc
     4321 accctggagg atgagcagac acggcggcag aagctcacag cggagtttga ggaggctcaa
     4381 agtacagcgt gtcggttaca agaagagctg gagaagctcc gtgctgctgg ccccctggag
     4441 tcttcaggaa tagaagaagt tacacagctg aaggagagac tagaaaaaga gaagaggtta
     4501 acaagtgacc tgggacgtgc tgctaccaaa cttcaggaac tgttgaagac aacccaggag
     4561 cagctgacaa aagagaagga cacggtgaag aagttgcaag aacagctggg aaaagcagag
     4621 gatggtagca gctcaaagga gggaacctct gtctgagtct cctcggcaaa ctgttcaact
     4681 taccaaaatg ccttacacat tccttacaaa taaaccaacc aacacagcgt tatccaggcc
     4741 caacttctag tgaagccatt ggagacaagt ctcagaacca cagaaataaa tcttccagaa
     4801 ccccagtctg taaaagaacc tttgtcacat ttgataaaca ctattcccgg gagcagccct
     4861 ggaccacctc gagcagacgc caaagccctc ctcaatgctg acagaccagg gtgtgctggg
     4921 agtccaggac gctcgggatc atgtcaatca gtgcaattgt ctgtatttct cagtggggcc
     4981 gggtcgggaa gcaacaggcc aggtggtgag ttctcagagg ctgctgagca gactggaagg
     5041 ccccagccca gcccagccca gcaaggctgc agcccctcac ccctggaagt tgccaagcag
     5101 aactgacatg tgactgcctg gatgtcaatg ccattaaaac caacgtgttg cccggca
//
