LOCUS       NM_031706                696 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein S8 (Rps8), mRNA.
ACCESSION   NM_031706
VERSION     NM_031706.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (bases 1 to 696)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 696)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   5  (bases 1 to 696)
  AUTHORS   Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M.
  TITLE     Analysis of the myosin-II-responsive focal adhesion proteome
            reveals a role for beta-Pix in negative regulation of focal
            adhesion maturation
  JOURNAL   Nat Cell Biol 13 (4), 383-393 (2011)
   PUBMED   21423176
REFERENCE   6  (bases 1 to 696)
  AUTHORS   Peng,J., Kim,M.J., Cheng,D., Duong,D.M., Gygi,S.P. and Sheng,M.
  TITLE     Semiquantitative proteomic analysis of rat forebrain postsynaptic
            density fractions by mass spectrometry
  JOURNAL   J Biol Chem 279 (20), 21003-21011 (2004)
   PUBMED   15020595
REFERENCE   7  (bases 1 to 696)
  AUTHORS   Vladimirov,S.N., Ivanov,A.V., Karpova,G.G., Musolyamov,A.K.,
            Egorov,T.A., Thiede,B., Wittmann-Liebold,B. and Otto,A.
  TITLE     Characterization of the human small-ribosomal-subunit proteins by
            N-terminal and internal sequencing, and mass spectrometry
  JOURNAL   Eur J Biochem 239 (1), 144-149 (1996)
   PUBMED   8706699
REFERENCE   8  (bases 1 to 696)
  AUTHORS   Chan,Y.L., Lin,A., Paz,V. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein S8
  JOURNAL   Nucleic Acids Res 15 (22), 9451-9459 (1987)
   PUBMED   3684599
REFERENCE   9  (bases 1 to 696)
  AUTHORS   Wittmann-Liebold,B., Geissler,A.W., Lin,A. and Wool,I.G.
  TITLE     Sequence of the amino-terminal region of rat liver ribosomal
            proteins S4, S6, S8, L6, L7a, L18, L27, L30, L37, L37a, and L39
  JOURNAL   J Supramol Struct 12 (4), 425-433 (1979)
   PUBMED   398910
REFERENCE   10 (bases 1 to 696)
  AUTHORS   Collatz,E., Wool,I.G., Lin,A. and Stoffler,G.
  TITLE     The isolation of eukaryotic ribosomal proteins. The purification
            and characterization of the 40 S ribosomal subunit proteins S2, S3,
            S4, S5, S6, S7, S8, S9, S13, S23/S24, S27, and S28
  JOURNAL   J Biol Chem 251 (15), 4666-4672 (1976)
   PUBMED   947902
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from X06423.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: X06423.1, BC166878.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMN06621351
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..696
                     /gene="Rps8"
                     /note="ribosomal protein S8"
                     /db_xref="GeneID:65136"
                     /db_xref="RGD:61910"
     exon            1..27
                     /gene="Rps8"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..650
                     /gene="Rps8"
                     /note="40S ribosomal protein S8"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS8"
                     /protein_id="NP_113894.1"
                     /db_xref="GeneID:65136"
                     /db_xref="RGD:61910"
                     /translation="MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIH
                     TVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIV
                     LIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISS
                     LLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK"
     exon            28..134
                     /gene="Rps8"
                     /inference="alignment:Splign:2.1.0"
     exon            135..234
                     /gene="Rps8"
                     /inference="alignment:Splign:2.1.0"
     exon            235..410
                     /gene="Rps8"
                     /inference="alignment:Splign:2.1.0"
     exon            411..540
                     /gene="Rps8"
                     /inference="alignment:Splign:2.1.0"
     exon            541..696
                     /gene="Rps8"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      696
                     /gene="Rps8"
                     /note="poly A site"
ORIGIN      
        1 ctctttccag ccagcgccga gcgatgggca tctctcggga caactggcac aagcgccgca
       61 agaccggggg taagagaaaa ccctaccaca agaagcggaa gtatgagctg ggacggccgg
      121 ccgccaacac taagattggc cctcgccgca tacatacagt ccgagttcga ggaggcaata
      181 agaagtatcg tgctctgaga ttggatgtgg ggaacttttc ctggggctca gagtgttgta
      241 ctcgcaaaac aaggatcatt gatgttgtct acaatgcatc caataacgag cttgtccgca
      301 ccaagaccct ggtgaagaac tgcattgtgc ttattgacag cacaccgtac cgacagtggt
      361 acgagtccca ctatgcactg cccctgggcc gcaagaaggg ggccaagctg actcctgagg
      421 aggaagagat tttaaacaaa aaacgatcaa agaaaattca gaagaaatat gatgaaagga
      481 aaaagaatgc caaaatcagc agtcttctgg aggagcagtt ccagcagggc aagcttctcg
      541 cctgtattgc ctcaagacca ggccagtgtg gcagagcaga tggctatgtg ctcgaaggca
      601 aggagctgga gttctatctg cggaagatca aagcccggaa aggcaaataa actgtcatag
      661 ctcgtgtaat aaaggtgttt gctgttctgt atatgt
//
