LOCUS       NM_001005528             466 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein s25 (Rps25), mRNA.
ACCESSION   NM_001005528 XM_217121
VERSION     NM_001005528.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Zanivan,S., Maione,F., Hein,M.Y., Hernandez-Fernaud,J.R.,
            Ostasiewicz,P., Giraudo,E. and Mann,M.
  TITLE     SILAC-based proteomics of human primary endothelial cell
            morphogenesis unveils tumor angiogenic markers
  JOURNAL   Mol Cell Proteomics 12 (12), 3599-3611 (2013)
   PUBMED   23979707
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   3  (bases 1 to 466)
  AUTHORS   Todd,M.A. and Picketts,D.J.
  TITLE     PHF6 interacts with the nucleosome remodeling and deacetylation
            (NuRD) complex
  JOURNAL   J Proteome Res 11 (8), 4326-4337 (2012)
   PUBMED   22720776
REFERENCE   4  (bases 1 to 466)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   5  (bases 1 to 466)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   6  (bases 1 to 466)
  AUTHORS   Vladimirov,S.N., Ivanov,A.V., Karpova,G.G., Musolyamov,A.K.,
            Egorov,T.A., Thiede,B., Wittmann-Liebold,B. and Otto,A.
  TITLE     Characterization of the human small-ribosomal-subunit proteins by
            N-terminal and internal sequencing, and mass spectrometry
  JOURNAL   Eur J Biochem 239 (1), 144-149 (1996)
   PUBMED   8706699
REFERENCE   7  (bases 1 to 466)
  AUTHORS   Laine,R.O., Shay,N.F. and Kilberg,M.S.
  TITLE     Nuclear retention of the induced mRNA following amino
            acid-dependent transcriptional regulation of mammalian ribosomal
            proteins L17 and S25
  JOURNAL   J Biol Chem 269 (13), 9693-9697 (1994)
   PUBMED   8144559
REFERENCE   8  (bases 1 to 466)
  AUTHORS   Chan,Y.L. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein S25
  JOURNAL   Biochem Biophys Res Commun 186 (3), 1688-1693 (1992)
   PUBMED   1354961
REFERENCE   9  (bases 1 to 466)
  AUTHORS   Li,M.L., Latoud,C. and Center,M.S.
  TITLE     Cloning and sequencing a cDNA encoding human ribosomal protein S25
  JOURNAL   Gene 107 (2), 329-333 (1991)
   PUBMED   1748303
REFERENCE   10 (bases 1 to 466)
  AUTHORS   Marion,M.J. and Marion,C.
  TITLE     Ribosomal proteins S2, S6, S10, S14, S15 and S25 are localized on
            the surface of mammalian 40 S subunits and stabilize their
            conformation. A study with immobilized trypsin
  JOURNAL   FEBS Lett 232 (2), 281-285 (1988)
   PUBMED   3378620
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from X62482.1.
            
            [WARNING] On Apr 30, 2024 this sequence was replaced by
            NM_001005528.2.
            
            On Oct 8, 2004 this sequence version replaced XM_217121.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM103521.1, BQ200043.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..466
                     /gene="Rps25"
                     /note="ribosomal protein s25"
                     /db_xref="GeneID:122799"
                     /db_xref="RGD:621043"
     exon            1..42
                     /gene="Rps25"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..417
                     /gene="Rps25"
                     /note="40S ribosomal protein S25"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS25"
                     /protein_id="NP_001005528.1"
                     /db_xref="GeneID:122799"
                     /db_xref="RGD:621043"
                     /translation="MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKL
                     NNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSK
                     HRAQVIYTRNTKGGDAPAAGEDA"
     exon            43..138
                     /gene="Rps25"
                     /inference="alignment:Splign:2.1.0"
     exon            139..322
                     /gene="Rps25"
                     /inference="alignment:Splign:2.1.0"
     exon            323..421
                     /gene="Rps25"
                     /inference="alignment:Splign:2.1.0"
     exon            422..466
                     /gene="Rps25"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      465
                     /gene="Rps25"
ORIGIN      
        1 tgtggctgca gtggtccaca ctactctctg agtttcgcca tgccgcccaa agacgacaag
       61 aagaagaagg atgccggaaa gtcggccaaa aaagacaagg acccagtaaa taaatctggt
      121 ggcaaggcca aaaagaagaa gtggtccaaa ggcaaagttc gggacaagct gaacaatctc
      181 gtcctgtttg acaaagctac ttacgacaaa ctttgtaagg aagttcccaa ctataagctt
      241 attactccag ctgtggtctc cgagagactg aagattcgag gttccttggc cagggcagcc
      301 cttcaggagc tacttagtaa aggacttatc aagctggttt caaagcacag agcccaagta
      361 atttacacca gaaacacaaa gggtggagat gccccagctg ctggtgaaga tgcataaaca
      421 gattgaatca gctgtacatt tgggaaaata aaactttatt gaatca
//
