LOCUS       NM_031111                359 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein S21 (Rps21), mRNA.
ACCESSION   NM_031111
VERSION     NM_031111.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   2  (bases 1 to 359)
  AUTHORS   O'Donohue,M.F., Choesmel,V., Faubladier,M., Fichant,G. and
            Gleizes,P.E.
  TITLE     Functional dichotomy of ribosomal proteins during the synthesis of
            mammalian 40S ribosomal subunits
  JOURNAL   J Cell Biol 190 (5), 853-866 (2010)
   PUBMED   20819938
REFERENCE   3  (bases 1 to 359)
  AUTHORS   Girard,A., Sachidanandam,R., Hannon,G.J. and Carmell,M.A.
  TITLE     A germline-specific class of small RNAs binds mammalian Piwi
            proteins
  JOURNAL   Nature 442 (7099), 199-202 (2006)
   PUBMED   16751776
REFERENCE   4  (bases 1 to 359)
  AUTHORS   Chan,Y.L., Olvera,J. and Wool,I.G.
  TITLE     The primary structures of rat ribosomal proteins: the
            characterization of the cDNAs for S21 and L39, corrections in the
            sequences of L7 and L18a, and the identification of L33
  JOURNAL   Biochem Biophys Res Commun 213 (3), 1042-1050 (1995)
   PUBMED   7654221
REFERENCE   5  (bases 1 to 359)
  AUTHORS   Itoh,T., Otaka,E. and Matsui,K.A.
  TITLE     Primary structures of ribosomal protein YS25 from Saccharomyces
            cerevisiae and its counterparts from Schizosaccharomyces pombe and
            rat liver
  JOURNAL   Biochemistry 24 (25), 7418-7423 (1985)
   PUBMED   3910104
REFERENCE   6  (bases 1 to 359)
  AUTHORS   Collatz,E., Ulbrich,N., Tsurugi,K., Lightfoot,H.N., MacKinlay,W.,
            Lin,A. and Wool,I.G.
  TITLE     Isolation of eukaryotic ribosomal proteins. Purification and
            characterization of the 40 S ribosomal subunit proteins Sa, Sc,
            S3a, S3b, S5', S9, S10, S11, S12, S14, S15, S15', S16, S17, S18,
            S19, S20, S21, S26, S27', and S29
  JOURNAL   J Biol Chem 252 (24), 9071-9080 (1977)
   PUBMED   925037
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from X79059.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ221719.1, FQ222346.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q43"
     gene            1..359
                     /gene="Rps21"
                     /note="ribosomal protein S21"
                     /db_xref="GeneID:81775"
                     /db_xref="RGD:621038"
     exon            1..30
                     /gene="Rps21"
                     /inference="alignment:Splign:2.1.0"
     exon            31..93
                     /gene="Rps21"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..295
                     /gene="Rps21"
                     /note="40S ribosomal protein S21"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS21"
                     /protein_id="NP_112373.1"
                     /db_xref="GeneID:81775"
                     /db_xref="RGD:621038"
                     /translation="MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRSTG
                     RFNGQFKTYGICGAIRRMGESDDSILRLAKADGIVSKNF"
     exon            94..157
                     /gene="Rps21"
                     /inference="alignment:Splign:2.1.0"
     exon            158..229
                     /gene="Rps21"
                     /inference="alignment:Splign:2.1.0"
     exon            230..285
                     /gene="Rps21"
                     /inference="alignment:Splign:2.1.0"
     exon            286..345
                     /gene="Rps21"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttctgtgtt ctccgtagac ccgtgagcag ggacggcctc ggtatgcaga acgacgccgg
       61 cgagtttgtg gacctgtacg tgccgcggaa atgctccgcg agcaaccgca tcattgctgc
      121 caaggaccac gcgtccatcc agatgaatgt ggccgaggtt gacaggagta caggccgatt
      181 taatggtcag tttaaaacct acggcatctg cggggccatt cgcaggatgg gcgagtcaga
      241 tgattctatt ctccgattgg ctaaggctga tggaattgtc tcaaagaact tttgagccag
      301 aagaaatcgg gaataatttg ttataaataa aagtgataat aagtaaaaaa aaaaaaaaa
//
