LOCUS       NM_001420251             812 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein S19 binding protein 1
            (Rps19bp1), mRNA.
ACCESSION   NM_001420251
VERSION     NM_001420251.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Armour,S.M., Bennett,E.J., Braun,C.R., Zhang,X.Y., McMahon,S.B.,
            Gygi,S.P., Harper,J.W. and Sinclair,D.A.
  TITLE     A high-confidence interaction map identifies SIRT1 as a mediator of
            acetylation of USP22 and the SAGA coactivator complex
  JOURNAL   Mol Cell Biol 33 (8), 1487-1502 (2013)
   PUBMED   23382074
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (bases 1 to 812)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 812)
  AUTHORS   Maeda,N., Toku,S., Kenmochi,N. and Tanaka,T.
  TITLE     A novel nucleolar protein interacts with ribosomal protein S19
  JOURNAL   Biochem Biophys Res Commun 339 (1), 41-46 (2006)
   PUBMED   16289379
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV213841.1, SRR26643429.28117.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760476, SAMN12840110
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-62                JAXUCZ010000007.1  113692962-113693023 c
            63-197              JAXUCZ010000007.1  113692719-113692853 c
            198-295             JAXUCZ010000007.1  113690348-113690445 c
            296-812             JAXUCZ010000007.1  113689636-113690152 c
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..812
                     /gene="Rps19bp1"
                     /gene_synonym="RGD1562823"
                     /note="ribosomal protein S19 binding protein 1"
                     /db_xref="GeneID:500907"
                     /db_xref="RGD:1562823"
     exon            1..62
                     /gene="Rps19bp1"
                     /gene_synonym="RGD1562823"
                     /inference="alignment:Splign:2.1.0"
     CDS             11..436
                     /gene="Rps19bp1"
                     /gene_synonym="RGD1562823"
                     /codon_start=1
                     /product="active regulator of SIRT1"
                     /protein_id="NP_001407180.1"
                     /db_xref="GeneID:500907"
                     /db_xref="RGD:1562823"
                     /translation="MSAALLRRGLELLEASEAPRAVPGQAKASGTPVKQTRRARAKAK
                     QAVKLRNSAKGKVPKSALAEYQKRQCQDHLRANLKFMTSMRSTVPESVTQQILQQNQG
                     RKACDRLVAKMNKKKKKKAEGTVFTDEDFEKFQREYFGS"
     exon            63..197
                     /gene="Rps19bp1"
                     /gene_synonym="RGD1562823"
                     /inference="alignment:Splign:2.1.0"
     exon            198..295
                     /gene="Rps19bp1"
                     /gene_synonym="RGD1562823"
                     /inference="alignment:Splign:2.1.0"
     exon            296..812
                     /gene="Rps19bp1"
                     /gene_synonym="RGD1562823"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcttggcagc atgtcggcgg cgttgttacg gcgcggcttg gagcttttag aggcgtccga
       61 ggctcctcgt gccgtacccg gccaggccaa ggcgagcggg actccggtga agcagacccg
      121 gagggcgaga gccaaggcca aacaggccgt gaaactacgg aactcagcga agggaaaagt
      181 acctaagtcc gcattagctg agtaccagaa acggcagtgt caagaccacc tcagagcaaa
      241 cctgaagttt atgaccagca tgagaagcac cgtgcccgag tctgtgaccc agcagattct
      301 gcagcagaac caaggccgaa aagcatgtga tcggctagtg gccaagatga acaagaagaa
      361 gaagaagaag gctgagggca ctgtattcac tgacgaagac ttcgagaagt tccagaggga
      421 atattttggc agctagactt cctgcggaaa tgaatggtgg ggacaaaagg cactaatctc
      481 ctttgactgc catatctctg ctgtcctgtg tccctgcagt gctgtgccgt gggcgaccag
      541 caggtggcag tgcaaatcta gcctggctca ggaagccata tgcttctatc cgagggacac
      601 tggaacagag ccgcaaggcc tccagcaaat tttccctcag actgaagtgg acttctgttt
      661 gggcagagcc gtcagcaccc tgccagaaaa gattctgccc tgtcggctct cacgaggatc
      721 aggtgtgggc tgagcaggaa cttggcctgc tcagaccaca cctcaagctg taattcggct
      781 gttaggttcg aataaatgtg gatttgggca aa
//
