LOCUS       NM_001037346             548 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus ribosomal protein S19 (Rps19), mRNA.
ACCESSION   NM_001037346 XM_218456 XM_574391
VERSION     NM_001037346.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Henras,A.K., Plisson-Chastang,C., O'Donohue,M.F., Chakraborty,A.
            and Gleizes,P.E.
  TITLE     An overview of pre-ribosomal RNA processing in eukaryotes
  JOURNAL   Wiley Interdiscip Rev RNA 6 (2), 225-242 (2015)
   PUBMED   25346433
  REMARK    Review article
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Falix,F.A., Weeda,V.B., Labruyere,W.T., Poncy,A., de Waart,D.R.,
            Hakvoort,T.B., Lemaigre,F., Gaemers,I.C., Aronson,D.C. and
            Lamers,W.H.
  TITLE     Hepatic Notch2 deficiency leads to bile duct agenesis perinatally
            and secondary bile duct formation after weaning
  JOURNAL   Dev Biol 396 (2), 201-213 (2014)
   PUBMED   25446530
REFERENCE   3  (bases 1 to 548)
  AUTHORS   Zanivan,S., Maione,F., Hein,M.Y., Hernandez-Fernaud,J.R.,
            Ostasiewicz,P., Giraudo,E. and Mann,M.
  TITLE     SILAC-based proteomics of human primary endothelial cell
            morphogenesis unveils tumor angiogenic markers
  JOURNAL   Mol Cell Proteomics 12 (12), 3599-3611 (2013)
   PUBMED   23979707
REFERENCE   4  (bases 1 to 548)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   5  (bases 1 to 548)
  AUTHORS   Sloan,K.E., Mattijssen,S., Lebaron,S., Tollervey,D., Pruijn,G.J.
            and Watkins,N.J.
  TITLE     Both endonucleolytic and exonucleolytic cleavage mediate ITS1
            removal during human ribosomal RNA processing
  JOURNAL   J Cell Biol 200 (5), 577-588 (2013)
   PUBMED   23439679
REFERENCE   6  (bases 1 to 548)
  AUTHORS   Vladimirov,S.N., Ivanov,A.V., Karpova,G.G., Musolyamov,A.K.,
            Egorov,T.A., Thiede,B., Wittmann-Liebold,B. and Otto,A.
  TITLE     Characterization of the human small-ribosomal-subunit proteins by
            N-terminal and internal sequencing, and mass spectrometry
  JOURNAL   Eur J Biochem 239 (1), 144-149 (1996)
   PUBMED   8706699
REFERENCE   7  (bases 1 to 548)
  AUTHORS   Suzuki,K., Olvera,J. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein S19
  JOURNAL   Biochimie 72 (4), 299-302 (1990)
   PUBMED   2116918
REFERENCE   8  (bases 1 to 548)
  AUTHORS   Lutsch,G., Stahl,J., Kargel,H.J., Noll,F. and Bielka,H.
  TITLE     Immunoelectron microscopic studies on the location of ribosomal
            proteins on the surface of the 40S ribosomal subunit from rat liver
  JOURNAL   Eur J Cell Biol 51 (1), 140-150 (1990)
   PUBMED   2328735
REFERENCE   9  (bases 1 to 548)
  AUTHORS   Bommer,U.A., Stahl,J., Henske,A., Lutsch,G. and Bielka,H.
  TITLE     Identification of proteins of the 40 S ribosomal subunit involved
            in interaction with initiation factor eIF-2 in the quaternary
            initiation complex by means of monospecific antibodies
  JOURNAL   FEBS Lett 233 (1), 114-118 (1988)
   PUBMED   3384085
REFERENCE   10 (bases 1 to 548)
  AUTHORS   Collatz,E., Ulbrich,N., Tsurugi,K., Lightfoot,H.N., MacKinlay,W.,
            Lin,A. and Wool,I.G.
  TITLE     Isolation of eukaryotic ribosomal proteins. Purification and
            characterization of the 40 S ribosomal subunit proteins Sa, Sc,
            S3a, S3b, S5', S9, S10, S11, S12, S14, S15, S15', S16, S17, S18,
            S19, S20, S21, S26, S27', and S29
  JOURNAL   J Biol Chem 252 (24), 9071-9080 (1977)
   PUBMED   925037
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB720565.1 and BC087641.1.
            
            On Apr 13, 2007 this sequence version replaced NM_001037346.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ229780.1, FQ138890.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-28                CB720565.1         1-28
            29-548              BC087641.1         1-520
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..548
                     /gene="Rps19"
                     /gene_synonym="Rps19l2"
                     /note="ribosomal protein S19"
                     /db_xref="GeneID:29287"
                     /db_xref="RGD:68440"
     exon            1..52
                     /gene="Rps19"
                     /gene_synonym="Rps19l2"
                     /inference="alignment:Splign:2.1.0"
     CDS             53..490
                     /gene="Rps19"
                     /gene_synonym="Rps19l2"
                     /note="40S ribosomal protein S19; ribosomal protein
                     S19-like2"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS19"
                     /protein_id="NP_001032423.1"
                     /db_xref="GeneID:29287"
                     /db_xref="RGD:68440"
                     /translation="MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKE
                     LAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARR
                     VLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKKH"
     exon            53..123
                     /gene="Rps19"
                     /gene_synonym="Rps19l2"
                     /inference="alignment:Splign:2.1.0"
     exon            124..224
                     /gene="Rps19"
                     /gene_synonym="Rps19l2"
                     /inference="alignment:Splign:2.1.0"
     exon            225..408
                     /gene="Rps19"
                     /gene_synonym="Rps19l2"
                     /inference="alignment:Splign:2.1.0"
     exon            409..463
                     /gene="Rps19"
                     /gene_synonym="Rps19l2"
                     /inference="alignment:Splign:2.1.0"
     exon            464..529
                     /gene="Rps19"
                     /gene_synonym="Rps19l2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgggaaaccc cgtcgttccc tttcccctgg ctggcagcgc ggaggccgca cgatgcctgg
       61 agttactgta aaagacgtta accagcagga gttcgtcaga gctctggcag ccttcctcaa
      121 aaagtctggg aagctgaaag tccccgaatg ggtggacaca gtcaagttgg ccaaacataa
      181 agagcttgcc ccatatgatg agaactggtt ctacacacga gctgcttcca cagcacggca
      241 cctgtacctc cgtggtggtg caggggttgg ttccatgacc aagatctacg gaggacggca
      301 gagaaacggt gtcaggccca gccacttcag cagaggctct aagagtgtgg cccgccgggt
      361 cctccaagcc ctggaggggc tgaaaatggt ggaaaaggac caagatgggg gccgcaagct
      421 aacacctcag ggacagagag atctggacag gatcgccgga caggtggcag ctgccaacaa
      481 gaagcattag aacaaaggat gctgggttaa taaattgcct cattcataaa aaaaaaaaaa
      541 aaaaaaaa
//
