LOCUS       XM_002727833             549 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosomal protein S18-like 1
            (Rps18l1), mRNA.
ACCESSION   XM_002727833
VERSION     XM_002727833.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_002727833.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..549
                     /gene="Rps18l1"
                     /note="ribosomal protein S18-like 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     ESTs, 38 long SRA reads, 15 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100360679"
                     /db_xref="RGD:2321678"
     CDS             51..509
                     /gene="Rps18l1"
                     /codon_start=1
                     /product="40S ribosomal protein S18"
                     /protein_id="XP_002727879.1"
                     /db_xref="GeneID:100360679"
                     /db_xref="RGD:2321678"
                     /translation="MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVV
                     LRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANG
                     LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK"
ORIGIN      
        1 taaatagctc ttccacagga ggcctacaag ccgccgcttg tgccgccgcc atgtccctag
       61 tgatccccga gaagtttcag cacatcctgc gagtactcaa caccaacatc gatgggcggc
      121 ggaaaatagc cttcgctatc actgccatta agggtgtggg gcggagatac gctcatgtgg
      181 tgttgaggaa agcagacatt gacctcacca agagggctgg ggagctcacg gaggacgagg
      241 tggagcgtgt gatcaccatc atgcagaacc cacgacaata caagatccct gactggttct
      301 tgaacagaca gaaggacgtg aaggatggga agtatagcca ggttctggcc aacggtctag
      361 acaacaagct gcgtgaggac ctggagcggc tgaagaaaat ccgagcccat agagggctgc
      421 gccacttttg gggccttcgt gtccggggtc agcacaccaa gaccactggc cgcaggggcc
      481 gtactgtggg tgtgtccaag aagaaatgag tctttgggcc tttgctgtta ataaatagtt
      541 tatatacca
//
