LOCUS       NM_017152                493 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein S17 (Rps17), mRNA.
ACCESSION   NM_017152
VERSION     NM_017152.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Voorhees,R.M., Fernandez,I.S., Scheres,S.H. and Hegde,R.S.
  TITLE     Structure of the mammalian ribosome-Sec61 complex to 3.4 A
            resolution
  JOURNAL   Cell 157 (7), 1632-1643 (2014)
   PUBMED   24930395
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Zanivan,S., Maione,F., Hein,M.Y., Hernandez-Fernaud,J.R.,
            Ostasiewicz,P., Giraudo,E. and Mann,M.
  TITLE     SILAC-based proteomics of human primary endothelial cell
            morphogenesis unveils tumor angiogenic markers
  JOURNAL   Mol Cell Proteomics 12 (12), 3599-3611 (2013)
   PUBMED   23979707
REFERENCE   3  (bases 1 to 493)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   4  (bases 1 to 493)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   5  (bases 1 to 493)
  AUTHORS   Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M.
  TITLE     Analysis of the myosin-II-responsive focal adhesion proteome
            reveals a role for beta-Pix in negative regulation of focal
            adhesion maturation
  JOURNAL   Nat Cell Biol 13 (4), 383-393 (2011)
   PUBMED   21423176
REFERENCE   6  (bases 1 to 493)
  AUTHORS   Trinidad,J.C., Specht,C.G., Thalhammer,A., Schoepfer,R. and
            Burlingame,A.L.
  TITLE     Comprehensive identification of phosphorylation sites in
            postsynaptic density preparations
  JOURNAL   Mol Cell Proteomics 5 (5), 914-922 (2006)
   PUBMED   16452087
REFERENCE   7  (bases 1 to 493)
  AUTHORS   Yu,Y., Ji,H., Doudna,J.A. and Leary,J.A.
  TITLE     Mass spectrometric analysis of the human 40S ribosomal subunit:
            native and HCV IRES-bound complexes
  JOURNAL   Protein Sci 14 (6), 1438-1446 (2005)
   PUBMED   15883184
REFERENCE   8  (bases 1 to 493)
  AUTHORS   Vladimirov,S.N., Ivanov,A.V., Karpova,G.G., Musolyamov,A.K.,
            Egorov,T.A., Thiede,B., Wittmann-Liebold,B. and Otto,A.
  TITLE     Characterization of the human small-ribosomal-subunit proteins by
            N-terminal and internal sequencing, and mass spectrometry
  JOURNAL   Eur J Biochem 239 (1), 144-149 (1996)
   PUBMED   8706699
REFERENCE   9  (bases 1 to 493)
  AUTHORS   Nakanishi,O., Oyanagi,M., Kuwano,Y., Tanaka,T., Nakayama,T.,
            Mitsui,H., Nabeshima,Y. and Ogata,K.
  TITLE     Molecular cloning and nucleotide sequences of cDNAs specific for
            rat liver ribosomal proteins S17 and L30
  JOURNAL   Gene 35 (3), 289-296 (1985)
   PUBMED   3840111
REFERENCE   10 (bases 1 to 493)
  AUTHORS   Collatz,E., Ulbrich,N., Tsurugi,K., Lightfoot,H.N., MacKinlay,W.,
            Lin,A. and Wool,I.G.
  TITLE     Isolation of eukaryotic ribosomal proteins. Purification and
            characterization of the 40 S ribosomal subunit proteins Sa, Sc,
            S3a, S3b, S5', S9, S10, S11, S12, S14, S15, S15', S16, S17, S18,
            S19, S20, S21, S26, S27', and S29
  JOURNAL   J Biol Chem 252 (24), 9071-9080 (1977)
   PUBMED   925037
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC058484.1.
            
            On Aug 31, 2012 this sequence version replaced NM_017152.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC058484.1, FQ222382.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-493               BC058484.1         5-497
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q31"
     gene            1..493
                     /gene="Rps17"
                     /note="ribosomal protein S17"
                     /db_xref="GeneID:29286"
                     /db_xref="RGD:62027"
     exon            1..29
                     /gene="Rps17"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..434
                     /gene="Rps17"
                     /note="40S ribosomal protein S17"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS17"
                     /protein_id="NP_058848.2"
                     /db_xref="GeneID:29286"
                     /db_xref="RGD:62027"
                     /translation="MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSK
                     NLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT
                     KEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV"
     exon            30..181
                     /gene="Rps17"
                     /inference="alignment:Splign:2.1.0"
     exon            182..287
                     /gene="Rps17"
                     /inference="alignment:Splign:2.1.0"
     exon            288..353
                     /gene="Rps17"
                     /inference="alignment:Splign:2.1.0"
     exon            354..467
                     /gene="Rps17"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttcctctttt accgagaccc gtcaacatgg gccgcgttcg caccaagact gtgaagaagg
       61 cggcccgggt catcatcgag aagtactaca cgcgcctggg taatgacttt cacaccaaca
      121 agcgcgtgtg cgaggagatc gccatcatcc ccagcaaaaa ccttcggaac aagatagccg
      181 gctatgtcac gcatctgatg aagcggattc agagaggtcc tgtgagaggc atctccatca
      241 agttgcagga agaagagagg gagaggagag ataattatgt tcctgaggtc tcagccctag
      301 atcaggagat cattgaggta gatcctgaca ccaaggaaat gctgaagctt ctggactttg
      361 gcagtctctc caacctccag gtcactcagc ctacggttgg gatgaatttc aaaacaccac
      421 gtggagctgt ttaatccatt atgccatatt ttcaataaac ctgaaaaaaa aaaaaaaaaa
      481 aaaaaaaaaa aaa
//
