LOCUS       NM_017151                508 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein S15 (Rps15), mRNA.
ACCESSION   NM_017151
VERSION     NM_017151.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Voorhees,R.M., Fernandez,I.S., Scheres,S.H. and Hegde,R.S.
  TITLE     Structure of the mammalian ribosome-Sec61 complex to 3.4 A
            resolution
  JOURNAL   Cell 157 (7), 1632-1643 (2014)
   PUBMED   24930395
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   3  (bases 1 to 508)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   4  (bases 1 to 508)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   5  (bases 1 to 508)
  AUTHORS   Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M.
  TITLE     Analysis of the myosin-II-responsive focal adhesion proteome
            reveals a role for beta-Pix in negative regulation of focal
            adhesion maturation
  JOURNAL   Nat Cell Biol 13 (4), 383-393 (2011)
   PUBMED   21423176
REFERENCE   6  (bases 1 to 508)
  AUTHORS   Takasawa,S., Tohgo,A., Unno,M., Shiga,K., Yonekura,H. and
            Okamoto,H.
  TITLE     The primary structure of rat rig/ribosomal protein S15 gene
  JOURNAL   Biochim Biophys Acta 1132 (2), 228-230 (1992)
   PUBMED   1390896
REFERENCE   7  (bases 1 to 508)
  AUTHORS   Kitagawa,M., Takasawa,S., Kikuchi,N., Itoh,T., Teraoka,H.,
            Yamamoto,H. and Okamoto,H.
  TITLE     rig encodes ribosomal protein S15. The primary structure of
            mammalian ribosomal protein S15
  JOURNAL   FEBS Lett 283 (2), 210-214 (1991)
   PUBMED   2044758
REFERENCE   8  (bases 1 to 508)
  AUTHORS   Inoue,C., Igarashi,K., Kitagawa,M., Terazono,K., Takasawa,S.,
            Obata,K., Iwata,K., Yamamoto,H. and Okamoto,H.
  TITLE     Expression of the insulinoma gene rig during liver regeneration and
            in primary cultured hepatocytes
  JOURNAL   Biochem Biophys Res Commun 150 (3), 1302-1308 (1988)
   PUBMED   2829897
REFERENCE   9  (bases 1 to 508)
  AUTHORS   Takasawa,S., Yamamoto,H., Terazono,K. and Okamoto,H.
  TITLE     Novel gene activated in rat insulinomas
  JOURNAL   Diabetes 35 (10), 1178-1180 (1986)
   PUBMED   3019805
REFERENCE   10 (bases 1 to 508)
  AUTHORS   Collatz,E., Ulbrich,N., Tsurugi,K., Lightfoot,H.N., MacKinlay,W.,
            Lin,A. and Wool,I.G.
  TITLE     Isolation of eukaryotic ribosomal proteins. Purification and
            characterization of the 40 S ribosomal subunit proteins Sa, Sc,
            S3a, S3b, S5', S9, S10, S11, S12, S14, S15, S15', S16, S17, S18,
            S19, S20, S21, S26, S27', and S29
  JOURNAL   J Biol Chem 252 (24), 9071-9080 (1977)
   PUBMED   925037
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AA892895.1, M19393.1 and AI603168.1.
            
            On Jun 10, 2004 this sequence version replaced NM_017151.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ222928.1, FQ220999.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                AA892895.1         468-490             c
            24-198              M19393.1           24-198
            199-490             AA892895.1         1-292               c
            491-508             AI603168.1         1-18                c
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..508
                     /gene="Rps15"
                     /note="ribosomal protein S15"
                     /db_xref="GeneID:29285"
                     /db_xref="RGD:62026"
     exon            1..24
                     /gene="Rps15"
                     /inference="alignment:Splign:2.1.0"
     CDS             22..459
                     /gene="Rps15"
                     /note="40S ribosomal protein S15; RIG protein; insulinoma"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS19"
                     /protein_id="NP_058847.1"
                     /db_xref="GeneID:29285"
                     /db_xref="RGD:62026"
                     /translation="MAEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRR
                     LNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTF
                     NQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK"
     exon            25..110
                     /gene="Rps15"
                     /inference="alignment:Splign:2.1.0"
     exon            111..345
                     /gene="Rps15"
                     /inference="alignment:Splign:2.1.0"
     exon            346..492
                     /gene="Rps15"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttttcccag cagccgccaa gatggccgaa gtggagcaga agaaaaagcg aaccttccgc
       61 aagttcacct accgtggcgt ggacctcgac cagctgctgg acatgtccta tgagcagctg
      121 atgcagttgt acagcgcccg gcagagacgg cgcctgaacc gaggcctgcg gaggaagcag
      181 cactcactgc tcaagcgctt gaggaaggcc aagaaggagg cgccacccat ggagaagccg
      241 gaggtcgtga agacccacct tagggacatg atcattctgc ccgagatggt cggcagcatg
      301 gtgggtgtgt acaacggcaa gaccttcaac caggtggaga tcaaacccga gatgatcggc
      361 cactacctgg gcgagttctc catcacctac aagcctgtga agcacggccg gcccggcatt
      421 ggtgccaccc actcctcccg atttatcccc ctcaagtagt ggggacaata aagactcgtt
      481 ttcagccctg gaaaaaaaaa aaaaaaaa
//
