LOCUS       NM_031109                602 bp    mRNA    linear   ROD 08-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein S10 (Rps10), mRNA.
ACCESSION   NM_031109
VERSION     NM_031109.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Milochau,A., Lagree,V., Benassy,M.N., Chaignepain,S., Papin,J.,
            Garcia-Arcos,I., Lajoix,A., Monterrat,C., Coudert,L.,
            Schmitter,J.M., Ochoa,B. and Lang,J.
  TITLE     Synaptotagmin 11 interacts with components of the RNA-induced
            silencing complex RISC in clonal pancreatic beta-cells
  JOURNAL   FEBS Lett 588 (14), 2217-2222 (2014)
   PUBMED   24882364
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Zanivan,S., Maione,F., Hein,M.Y., Hernandez-Fernaud,J.R.,
            Ostasiewicz,P., Giraudo,E. and Mann,M.
  TITLE     SILAC-based proteomics of human primary endothelial cell
            morphogenesis unveils tumor angiogenic markers
  JOURNAL   Mol Cell Proteomics 12 (12), 3599-3611 (2013)
   PUBMED   23979707
REFERENCE   3  (bases 1 to 602)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   4  (bases 1 to 602)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   5  (bases 1 to 602)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   6  (bases 1 to 602)
  AUTHORS   Gluck,A., Chan,Y.L., Lin,A. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein S10
  JOURNAL   Eur J Biochem 182 (1), 105-109 (1989)
   PUBMED   2543570
REFERENCE   7  (bases 1 to 602)
  AUTHORS   Marion,M.J. and Marion,C.
  TITLE     Ribosomal proteins S2, S6, S10, S14, S15 and S25 are localized on
            the surface of mammalian 40 S subunits and stabilize their
            conformation. A study with immobilized trypsin
  JOURNAL   FEBS Lett 232 (2), 281-285 (1988)
   PUBMED   3378620
REFERENCE   8  (bases 1 to 602)
  AUTHORS   Reboud,A.M., Dubost,S. and Reboud,J.P.
  TITLE     Identification of the proteins interacting with tRNA in rat liver
            small ribosomal subunits
  JOURNAL   FEBS Lett 158 (2), 285-288 (1983)
   PUBMED   6873282
REFERENCE   9  (bases 1 to 602)
  AUTHORS   Gressner,A.M.
  TITLE     Two-dimensional electrophoretic analysis of ribosomal proteins from
            chronically injured liver
  JOURNAL   J Clin Chem Clin Biochem 17 (8), 541-545 (1979)
   PUBMED   501300
REFERENCE   10 (bases 1 to 602)
  AUTHORS   Collatz,E., Ulbrich,N., Tsurugi,K., Lightfoot,H.N., MacKinlay,W.,
            Lin,A. and Wool,I.G.
  TITLE     Isolation of eukaryotic ribosomal proteins. Purification and
            characterization of the 40 S ribosomal subunit proteins Sa, Sc,
            S3a, S3b, S5', S9, S10, S11, S12, S14, S15, S15', S16, S17, S18,
            S19, S20, S21, S26, S27', and S29
  JOURNAL   J Biol Chem 252 (24), 9071-9080 (1977)
   PUBMED   925037
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000020.1 and FM057870.1.
            
            On Oct 13, 2016 this sequence version replaced NM_031109.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ147102.1, FQ223309.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676810, SAMN16676811
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-16                JAXUCZ010000020.1  5700729-5700744     c
            17-558              FM057870.1         1-542
            559-602             JAXUCZ010000020.1  5696135-5696178     c
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..602
                     /gene="Rps10"
                     /note="ribosomal protein S10"
                     /db_xref="GeneID:81773"
                     /db_xref="RGD:621024"
     exon            1..39
                     /gene="Rps10"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..537
                     /gene="Rps10"
                     /note="40S ribosomal protein S10"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS10"
                     /protein_id="NP_112371.1"
                     /db_xref="GeneID:81773"
                     /db_xref="RGD:621024"
                     /translation="MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLH
                     VMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETG
                     RPRPKGPEGERPARFTRGEADRDTYRRSAVPPGADKKAEAGAGSATEFQFRGGFGRGR
                     GQPPQ"
     exon            40..189
                     /gene="Rps10"
                     /inference="alignment:Splign:2.1.0"
     exon            190..361
                     /gene="Rps10"
                     /inference="alignment:Splign:2.1.0"
     exon            362..439
                     /gene="Rps10"
                     /inference="alignment:Splign:2.1.0"
     exon            440..495
                     /gene="Rps10"
                     /inference="alignment:Splign:2.1.0"
     exon            496..602
                     /gene="Rps10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcctttccag cctccgcctc ggaccctgca gccgccgcga tgttgatgcc caagaagaac
       61 cggattgcca tctacgaact cctttttaag gaaggggtga tggttgccaa aaaagacgtc
      121 cacatgccca aacaccccga gctggcagac aagaacgttc ccaaccttca cgtcatgaag
      181 gccatgcagt ctctcaagtc tcgaggctac gtgaaggagc agtttgcttg gagacatttc
      241 tactggtacc tcacgaatga gggcatccag tacctccgag attacctgca cctacctccg
      301 gagatcgtgc ccgccaccct gcgccgcagc cgtcccgaga ctggcaggcc tcggcccaaa
      361 ggtccagagg gtgagcggcc tgcaagattc acaagagggg aggcagacag agacacctac
      421 agaaggagcg ctgtgccccc tggagctgac aagaaagctg aggctggggc tggctcggca
      481 acggagttcc agtttagagg gggtttcggt cgtggacgtg gtcagccacc tcagtgaagt
      541 tggagattat gttgtgttga ataaacttta aagaaaaacg tgttcactcg tgttgtagcc
      601 ta
//
