LOCUS       XM_039081345             704 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosomal protein lateral stalk
            subunit P2 (Rplp2), transcript variant X1, mRNA.
ACCESSION   XM_039081345
VERSION     XM_039081345.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039081345.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..704
                     /gene="Rplp2"
                     /gene_synonym="RP2"
                     /note="ribosomal protein lateral stalk subunit P2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 6 ESTs, 300 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 248 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:140662"
                     /db_xref="RGD:621775"
     CDS             324..668
                     /gene="Rplp2"
                     /gene_synonym="RP2"
                     /codon_start=1
                     /product="60S acidic ribosomal protein P2 isoform X1"
                     /protein_id="XP_038937273.1"
                     /db_xref="GeneID:140662"
                     /db_xref="RGD:621775"
                     /translation="MRYVASYLLAALGGNSNPSAKDIKKILDSVGIEADDERLNKVIS
                     ELNGKNIEDVIAQGVGKLASVPAGGAVAVSAAPGSAAPAAGSAPAAEEKKDEKKEESE
                     ESDDDMGFGLFD"
ORIGIN      
        1 gctgggaacg tgaggcgaaa aaggggattg aaaatttcgc ccgtgtcccc atggatttcg
       61 ggagactctc gcctatgtta caggagcact tggcacttga aaaaactctt gtttttgttg
      121 tgggaaacac atgaccgggg acaaggcaaa tttcttgctt ccggcgcacc cttatcgtca
      181 atgggaggcg cccctccgcg gcgccttgcg cgtcccggag acttctgggt agcggtttac
      241 ccccgcccac tgcgtcagca tcttcctttc gccgccggac gccgccgagg tcgcacgcgt
      301 gaggtctgtc caccgcaacc gacatgcgct acgttgcctc ttatctgctg gccgccctcg
      361 ggggcaactc caatcccagc gccaaagaca tcaagaaaat actagacagc gtgggcatcg
      421 aggcggacga tgaacgactc aacaaggtca tcagtgagct gaatggaaag aatattgagg
      481 atgtcatcgc tcagggtgtt ggcaagctgg ccagtgtgcc tgctggtggg gctgtggctg
      541 tttctgctgc ccctggctct gcagctcctg ctgctggttc tgcccccgct gcagaggaga
      601 agaaagatga gaagaaagag gagtctgagg agtcggatga cgacatggga tttggcctgt
      661 ttgattaagt tcccctgcca ataaagcctt tttatgtatt ttga
//
