LOCUS       XM_227546               1034 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosomal protein lateral stalk
            subunit P0 like 1 (Rplp0l1), mRNA.
ACCESSION   XM_227546
VERSION     XM_227546.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_227546.10.
            
            On Jan 21, 2021 this sequence version replaced XM_227546.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1034
                     /gene="Rplp0l1"
                     /note="ribosomal protein lateral stalk subunit P0 like 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins, and 64% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:295340"
                     /db_xref="RGD:1564469"
     CDS             72..1019
                     /gene="Rplp0l1"
                     /codon_start=1
                     /product="60S acidic ribosomal protein P0-like"
                     /protein_id="XP_227546.4"
                     /db_xref="GeneID:295340"
                     /db_xref="RGD:1564469"
                     /translation="MPREDRVTCKSNYFLKIIQLLDDYPKCFIMGADNVSSKQMQQIR
                     MSLQGKAVVLMIKNNAMMRKAIREHLEKNRALEKLPPHTRGNVGFMFTKEDLTEIRDM
                     LLTNKVPAATQAGALAPCEVTAHAQNTGLGPEKTSFFQVLGINTKISRGIIEILSDVQ
                     LIKTGNKVGAGEATLLNISPSVSGLIIRQVFDNGSIYNPEVLDITEQILRSHFLEGVR
                     NVAAVCLQIGEPTVTSVPHSIINGSKRVLALSVETDYTFPLAEKVKAFLADPSAFAAA
                     APVAAATTAAPAAAAAPAKAKAKEESEESDEDVRFGLFD"
ORIGIN      
        1 ctcgccaggc gtcctcatta gagtgacatc atctttaaac cccccgtggc aatccctgac
       61 gcaccaccgt gatgcctagg gaagacaggg tgacctgcaa gtccaactac ttccttaaga
      121 tcatccaact tttggatgat tacccaaaat gcttcattat gggagcagac aatgtgagct
      181 ccaagcagat gcagcagatc cgcatgtccc tccaagggaa ggctgtggtg ctgatgatta
      241 agaacaacgc catgatgcgc aaggccatca gggagcacct ggagaaaaac cgagctctgg
      301 agaaactgcc gcctcacacc cgggggaacg tgggcttcat gttcaccaag gaggacctca
      361 ccgagattag ggacatgcta ctgaccaata aggtgccagc tgccactcaa gcaggtgccc
      421 tcgccccatg tgaggtcact gcgcatgctc agaacactgg tctggggcct gagaagacct
      481 ctttcttcca agttttgggc atcaacacca aaatctccag aggtatcatt gaaattctga
      541 gtgatgtgca gctgataaaa actggaaaca aggtaggagc cggtgaagcc acactgctga
      601 acatctcccc ctctgtctct gggctgatca tccggcaggt gttcgacaat ggcagcattt
      661 acaaccccga agtgctggac atcacagagc agatcctgcg ctctcacttc ctagagggtg
      721 tccgcaatgt ggccgccgtc tgtctgcaga ttggtgagcc aactgttacc tcagtgcctc
      781 actccatcat caatgggtcc aagcgggtcc tggctttgtc tgtggagact gactacactt
      841 tcccactggc tgaaaaggtc aaggccttcc tggccgatcc atctgcattt gcggctgcag
      901 cccctgtggc tgctgccacc actgctgctc ctgcagctgc tgcagcccca gccaaggcca
      961 aagcaaagga agagtcagag gaatcagatg aggacgtacg attcggtctc ttcgactaac
     1021 cctctcaatg caag
//
