LOCUS       NM_001100534             872 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein L7 (Rpl7), mRNA.
ACCESSION   NM_001100534 XM_001062960 XM_216318
VERSION     NM_001100534.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (bases 1 to 872)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 872)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   5  (bases 1 to 872)
  AUTHORS   Cook,D., Sanchez-Carbente Mdel,R., Lachance,C., Radzioch,D.,
            Tremblay,S., Khandjian,E.W., DesGroseillers,L. and Murai,K.K.
  TITLE     Fragile X related protein 1 clusters with ribosomes and messenger
            RNAs at a subset of dendritic spines in the mouse hippocampus
  JOURNAL   PLoS One 6 (10), e26120 (2011)
   PUBMED   22022532
REFERENCE   6  (bases 1 to 872)
  AUTHORS   Horne,Z. and Hesketh,J.
  TITLE     Immunological localization of ribosomes in striated rat muscle.
            Evidence for myofibrillar association and ontological changes in
            the subsarcolemmal:myofibrillar distribution
  JOURNAL   Biochem J 268 (1), 231-236 (1990)
   PUBMED   2188648
REFERENCE   7  (bases 1 to 872)
  AUTHORS   Giallongo,A., Yon,J. and Fried,M.
  TITLE     Ribosomal protein L7a is encoded by a gene (Surf-3) within the
            tightly clustered mouse surfeit locus
  JOURNAL   Mol Cell Biol 9 (1), 224-231 (1989)
   PUBMED   2648130
REFERENCE   8  (bases 1 to 872)
  AUTHORS   Lin,A., Chan,Y.L., McNally,J., Peleg,D., Meyuhas,O. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L7. The presence
            near the amino terminus of L7 of five tandem repeats of a sequence
            of 12 amino acids
  JOURNAL   J Biol Chem 262 (26), 12665-12671 (1987)
   PUBMED   3624274
REFERENCE   9  (bases 1 to 872)
  AUTHORS   Kargel,H.J., Stahl,J., Gross,B., Knespel,S., Bielka,H. and
            Saarma,M.
  TITLE     Studies on interaction of 5 S RNA with ribosomal proteins
  JOURNAL   FEBS Lett 220 (1), 126-128 (1987)
   PUBMED   3301408
REFERENCE   10 (bases 1 to 872)
  AUTHORS   Tsurugi,K., Collatz,E., Todokoro,K. and Wool,I.G.
  TITLE     Isolation of eukaryotic ribosomal proteins. Purification and
            characterization of 60 S ribosomal subunit proteins L3, L6, L7',
            L8, L10, L15, L17, L18, L19, L23', L25, L27', L28, L29, L31, L32,
            L34, L35, L36, L36', and L37'
  JOURNAL   J Biol Chem 252 (11), 3961-3969 (1977)
   PUBMED   863909
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC159431.1.
            
            On or before Sep 7, 2008 this sequence version replaced
            XM_001062960.1, XM_216318.3.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC159431.1, FQ220373.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q11"
     gene            1..872
                     /gene="Rpl7"
                     /note="ribosomal protein L7"
                     /db_xref="GeneID:297755"
                     /db_xref="RGD:735169"
     exon            1..15
                     /gene="Rpl7"
                     /inference="alignment:Splign:2.1.0"
     CDS             2..784
                     /gene="Rpl7"
                     /note="60S ribosomal protein L7"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL30"
                     /protein_id="NP_001094004.1"
                     /db_xref="GeneID:297755"
                     /db_xref="RGD:735169"
                     /translation="MEAVPEKKKKVAAAPGTLKKKKVPAVPETLKKKRRNFAELKVKR
                     LRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLA
                     FVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLK
                     SVNELIYKRGYGKINKKRIALTDNSLVARSLGKFGIICMEDLIHEIYTVGKRFKEANN
                     FLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN"
     exon            16..160
                     /gene="Rpl7"
                     /inference="alignment:Splign:2.1.0"
     exon            161..327
                     /gene="Rpl7"
                     /inference="alignment:Splign:2.1.0"
     exon            328..575
                     /gene="Rpl7"
                     /inference="alignment:Splign:2.1.0"
     exon            576..785
                     /gene="Rpl7"
                     /inference="alignment:Splign:2.1.0"
     exon            786..850
                     /gene="Rpl7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 catggaggct gtaccagaga agaaaaagaa ggttgccgct gcgccaggaa cccttaagaa
       61 gaaaaaggtt cctgcggtgc cagaaaccct taagaaaaag cgaaggaatt tcgcagagtt
      121 gaaggtcaag cgcctgagga agaagtttgc cctgaagaca ctgcgaaagg caaggaggaa
      181 gctcatctat gagaaggcaa agcactatca caaggagtac agacagatgt accggactga
      241 gattcgcatg gctaggatgg cgaggaaagc tggcaacttc tatgtgcccg cagaaccaaa
      301 attggccttt gtcatcagaa tccgaggtat caatggagtg agcccaaagg tgcgcaaggt
      361 gctgcagctg ctccgtctcc ggcagatctt caatggcacc tttgtgaagc tcaacaaggc
      421 ttcagtgaac atgctgagga tcgtggagcc ctacattgca tgggggtacc ccaacctgaa
      481 gtcagtaaac gagctcatct acaaacgagg ctatggcaaa atcaataaaa agcgcattgc
      541 cttgacagat aactccttgg ttgctcgatc tcttggtaaa tttggcatca tctgcatgga
      601 ggatctaatt catgagatct atacagttgg aaaacgcttt aaggaagcaa ataacttcct
      661 gtggcccttc aaactgtctt ccccacgagg tggaatgaag aaaaagacaa ctcactttgt
      721 agaaggtgga gacgctggca acagggaaga ccagataaac aggcttatta gacggatgaa
      781 ctaaggtatt gcccgtggta tttttataat ctggtcggtt aataaacagt cacagcttgg
      841 caaattgaaa aaaaaaaaaa aaaaaaaaaa aa
//
