LOCUS       XM_039084950             975 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosomal protein L5-like 1 (Rpl5l1),
            mRNA.
ACCESSION   XM_039084950
VERSION     XM_039084950.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084950.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..975
                     /gene="Rpl5l1"
                     /note="ribosomal protein L5-like 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 19 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:501206"
                     /db_xref="RGD:1564051"
     CDS             20..913
                     /gene="Rpl5l1"
                     /codon_start=1
                     /product="60S ribosomal protein L5-like"
                     /protein_id="XP_038940878.1"
                     /db_xref="GeneID:501206"
                     /db_xref="RGD:1564051"
                     /translation="MGFMKVVKNKAYFKRYQVRFRRWRGGKTDYCARKRLVVQDKNKY
                     NTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAPYAHELPKYGVKVGLTNYAAAYCTG
                     LLLARRLLNRFGMDKIYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVF
                     GALKGAVDGVLSIPHSTKRFPGHDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA
                     YKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYDKKPKREVKKKRWNRPKMSLAQK
                     KDRVAQKKASFLRAQEWAAES"
ORIGIN      
        1 cgggtctctg tttcgcagga tggggttcat gaaagttgtc aagaataagg cctactttaa
       61 aagataccaa gtgagattta gaaggtggcg agggggtaaa actgactact gtgcacggaa
      121 acgattggtg gtccaggaca aaaataagta caacacacca aaatacagga tgatagttcg
      181 tgtaacgaac agagacatca tctgccagat tgcatatgcc cgtatagaag gggatatgat
      241 cgtctgtgca ccatatgcac atgaacttcc aaaatacggt gtgaaagttg gcttgacaaa
      301 ctatgctgca gcctattgca ctggcctgct gctggcccgc aggcttctga ataggtttgg
      361 catggacaag atctatgaag gccaagtgga ggtgaatgga gacgagtaca atgtggaaag
      421 cattgacggt cagcctggtg ccttcacttg ctatttggat gcgggtcttg cccgaactac
      481 aactggcaat aaagtttttg gcgccctgaa gggagctgtg gatggagtct tgtctatccc
      541 ccatagtacc aaacgattcc ctggccatga ctctgaaagc aaggagttca atgcagaggt
      601 gcaccggaag cacatcatgg gtcagaatgt ggcagactac atgcgctacc tgatggagga
      661 ggatgaggat gcgtataaga aacagttctc tcagtacatc aagaacaacg tgactccaga
      721 catgatggag gagatgtata agaaagctca tgctgctatc cgagagaatc cagtctatga
      781 caagaagccc aagagagaag tgaagaagaa gaggtggaat cgtcccaaaa tgtctcttgc
      841 ccagaagaaa gaccgggttg ctcaaaagaa ggcaagcttc ctcagagctc aggaatgggc
      901 tgctgaaagc taaagccatt ttctatgaag attttttcat aaagaaaata aacattgatc
      961 aaagcaaaaa aaaat
//
