LOCUS       NM_031105                507 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein L36A like 1 (Rpl36al1), mRNA.
ACCESSION   NM_031105
VERSION     NM_031105.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Kunarso,G., Wong,K.Y., Stanton,L.W. and Lipovich,L.
  TITLE     Detailed characterization of the mouse embryonic stem cell
            transcriptome reveals novel genes and intergenic splicing
            associated with pluripotency
  JOURNAL   BMC Genomics 9, 155 (2008)
   PUBMED   18400104
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 507)
  AUTHORS   Gallagher,M.J., Chan,Y.L., Lin,A. and Wool,I.G.
  TITLE     Primary structure of rat ribosomal protein L36a
  JOURNAL   DNA 7 (4), 269-273 (1988)
   PUBMED   3396452
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC058142.1 and AA955285.1.
            
            On Nov 23, 2005 this sequence version replaced NM_031105.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ218934.1, FQ217804.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132302, SAMEA5756307
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-488               BC058142.1         4-491
            489-507             AA955285.1         1-19                c
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q24"
     gene            1..507
                     /gene="Rpl36al1"
                     /gene_synonym="Rpl36al"
                     /note="ribosomal protein L36A like 1"
                     /db_xref="GeneID:81769"
                     /db_xref="RGD:621156"
     exon            1..62
                     /gene="Rpl36al1"
                     /gene_synonym="Rpl36al"
                     /inference="alignment:Splign:2.1.0"
     exon            63..495
                     /gene="Rpl36al1"
                     /gene_synonym="Rpl36al"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..412
                     /gene="Rpl36al1"
                     /gene_synonym="Rpl36al"
                     /note="60S ribosomal protein L36a; 60S ribosomal protein
                     L44; ribosomal protein L36A-like; large subunit ribosomal
                     protein L36a"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL42"
                     /protein_id="NP_112367.1"
                     /db_xref="GeneID:81769"
                     /db_xref="RGD:621156"
                     /translation="MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRK
                     QSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ
                     VIQF"
ORIGIN      
        1 atccgtccct ttcctgttcg gcgcgtgcgg ttgaggcggg gatcgctgct gccggtctct
       61 cgttttcatc gcagacactt ctgctgcaaa gatggtcaac gtacctaaaa cccgaaggac
      121 tttctgtaag aaatgtggca agcaccagcc tcacaaagtg acccagtata agaagggcaa
      181 ggattccctg tatgcccaag gaaagcggcg ctacgaccgg aagcagagtg gctatggcgg
      241 gcaaacaaag ccaatttttc gaaagaaggc caaaaccaca aagaagattg tgctcaggct
      301 tgagtgtgtt gagcccaact gcagatctaa gaggatgctg gccattaaga gatgcaagca
      361 ttttgaactg ggaggcgaca agaagagaaa gggtcaagtg atccagttct aaaacttgtg
      421 ttttcttaga ggaaaatact gaagcagtag aaaaatgacc tgctagagaa taaaagttat
      481 tgttactggt actaaaaaaa aaaaaaa
//
