LOCUS       NM_001128065             669 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein L36A (Rpl36a), mRNA.
ACCESSION   NM_001128065 XM_001068688 XM_214958
VERSION     NM_001128065.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Behrmann,E., Loerke,J., Budkevich,T.V., Yamamoto,K., Schmidt,A.,
            Penczek,P.A., Vos,M.R., Burger,J., Mielke,T., Scheerer,P. and
            Spahn,C.M.
  TITLE     Structural snapshots of actively translating human ribosomes
  JOURNAL   Cell 161 (4), 845-857 (2015)
   PUBMED   25957688
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   3  (bases 1 to 669)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   4  (bases 1 to 669)
  AUTHORS   Odintsova,T.I., Muller,E.C., Ivanov,A.V., Egorov,T.A., Bienert,R.,
            Vladimirov,S.N., Kostka,S., Otto,A., Wittmann-Liebold,B. and
            Karpova,G.G.
  TITLE     Characterization and analysis of posttranslational modifications of
            the human large cytoplasmic ribosomal subunit proteins by mass
            spectrometry and Edman sequencing
  JOURNAL   J Protein Chem 22 (3), 249-258 (2003)
   PUBMED   12962325
REFERENCE   5  (bases 1 to 669)
  AUTHORS   Gallagher,M.J., Chan,Y.L., Lin,A. and Wool,I.G.
  TITLE     Primary structure of rat ribosomal protein L36a
  JOURNAL   DNA 7 (4), 269-273 (1988)
   PUBMED   3396452
REFERENCE   6  (bases 1 to 669)
  AUTHORS   Tsurugi,K., Collatz,E., Todokoro,K. and Wool,I.G.
  TITLE     Isolation of eukaryotic ribosomal proteins. Purification and
            characterization of 60 S ribosomal subunit proteins L3, L6, L7',
            L8, L10, L15, L17, L18, L19, L23', L25, L27', L28, L29, L31, L32,
            L34, L35, L36, L36', and L37'
  JOURNAL   J Biol Chem 252 (11), 3961-3969 (1977)
   PUBMED   863909
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473969.2.
            
            On or before Jun 3, 2008 this sequence version replaced
            XM_001068688.1, XM_214958.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BF287837.1, FQ211253.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..669
                     /gene="Rpl36a"
                     /note="ribosomal protein L36A"
                     /db_xref="GeneID:292964"
                     /db_xref="RGD:1306640"
     exon            1..53
                     /gene="Rpl36a"
                     /inference="alignment:Splign:2.1.0"
     CDS             51..371
                     /gene="Rpl36a"
                     /note="60S ribosomal protein L36a; 60S ribosomal protein
                     L44"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL42"
                     /protein_id="NP_001121537.1"
                     /db_xref="GeneID:292964"
                     /db_xref="RGD:1306640"
                     /translation="MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRK
                     QSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ
                     VIQF"
     exon            54..159
                     /gene="Rpl36a"
                     /inference="alignment:Splign:2.1.0"
     exon            160..227
                     /gene="Rpl36a"
                     /inference="alignment:Splign:2.1.0"
     exon            228..350
                     /gene="Rpl36a"
                     /inference="alignment:Splign:2.1.0"
     exon            351..669
                     /gene="Rpl36a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgttgctgct ctagcctctc tctttctgag ctggtagcgc tcctgcaaac atggtgaacg
       61 ttcctaagac ccgccggaca ttctgcaaga aatgtgggaa gcaccaaccc cacaaggtga
      121 cgcagtacaa gaagggcaag gattctttgt atgcccaggg aaagcggcgt tatgacagga
      181 aacagagtgg ctacggcggg cagactaagc ccattttccg caaaaaggct aaaactacaa
      241 agaagattgt gctgagactg gagtgcgttg agcccaactg cagatctaag aggatgctgg
      301 ctattaagag atgcaagcat tttgaactag gaggtgacaa gaagagaaag ggccaagtga
      361 tccagttcta agctgatttt gttatgaaga caataaaatc ttgacctttc accccctttg
      421 attgctgttg gtcttttggg aaggggtaca gctttcagaa atgacctgaa aggctgtgtt
      481 tggtacttga gcactactct cagactgaac cttgttgagt ggtgagaaac atgacttgtc
      541 attgggttcc ctacttggtg tttagaatcc acaggctgct gctaatttat cataaaatcc
      601 aaagtagagt agagagtctt atttacagtc cacactttat ccccatcctg gaccctccga
      661 ctactccac
//
