LOCUS       NM_022504                364 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus ribosomal protein L36 (Rpl36), mRNA.
ACCESSION   NM_022504
VERSION     NM_022504.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Behrmann,E., Loerke,J., Budkevich,T.V., Yamamoto,K., Schmidt,A.,
            Penczek,P.A., Vos,M.R., Burger,J., Mielke,T., Scheerer,P. and
            Spahn,C.M.
  TITLE     Structural snapshots of actively translating human ribosomes
  JOURNAL   Cell 161 (4), 845-857 (2015)
   PUBMED   25957688
REFERENCE   2  (bases 1 to 364)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   3  (bases 1 to 364)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 364)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   5  (bases 1 to 364)
  AUTHORS   Sigal,A., Milo,R., Cohen,A., Geva-Zatorsky,N., Klein,Y., Alaluf,I.,
            Swerdlin,N., Perzov,N., Danon,T., Liron,Y., Raveh,T.,
            Carpenter,A.E., Lahav,G. and Alon,U.
  TITLE     Dynamic proteomics in individual human cells uncovers widespread
            cell-cycle dependence of nuclear proteins
  JOURNAL   Nat Methods 3 (7), 525-531 (2006)
   PUBMED   16791210
REFERENCE   6  (bases 1 to 364)
  AUTHORS   Trinidad,J.C., Specht,C.G., Thalhammer,A., Schoepfer,R. and
            Burlingame,A.L.
  TITLE     Comprehensive identification of phosphorylation sites in
            postsynaptic density preparations
  JOURNAL   Mol Cell Proteomics 5 (5), 914-922 (2006)
   PUBMED   16452087
REFERENCE   7  (bases 1 to 364)
  AUTHORS   Odintsova,T.I., Muller,E.C., Ivanov,A.V., Egorov,T.A., Bienert,R.,
            Vladimirov,S.N., Kostka,S., Otto,A., Wittmann-Liebold,B. and
            Karpova,G.G.
  TITLE     Characterization and analysis of posttranslational modifications of
            the human large cytoplasmic ribosomal subunit proteins by mass
            spectrometry and Edman sequencing
  JOURNAL   J Protein Chem 22 (3), 249-258 (2003)
   PUBMED   12962325
REFERENCE   8  (bases 1 to 364)
  AUTHORS   Chan,Y.L., Paz,V., Olvera,J. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L36
  JOURNAL   Biochem Biophys Res Commun 192 (2), 849-853 (1993)
   PUBMED   8484789
REFERENCE   9  (bases 1 to 364)
  AUTHORS   Tsurugi,K., Collatz,E., Todokoro,K. and Wool,I.G.
  TITLE     Isolation of eukaryotic ribosomal proteins. Purification and
            characterization of 60 S ribosomal subunit proteins L3, L6, L7',
            L8, L10, L15, L17, L18, L19, L23', L25, L27', L28, L29, L31, L32,
            L34, L35, L36, L36', and L37'
  JOURNAL   J Biol Chem 252 (11), 3961-3969 (1977)
   PUBMED   863909
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from X68284.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: X68284.1, BF555179.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q11"
     gene            1..364
                     /gene="Rpl36"
                     /note="ribosomal protein L36"
                     /db_xref="GeneID:58927"
                     /db_xref="RGD:62085"
     exon            1..13
                     /gene="Rpl36"
                     /inference="alignment:Splign:2.1.0"
     exon            14..108
                     /gene="Rpl36"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..333
                     /gene="Rpl36"
                     /note="60S ribosomal protein L36"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL36"
                     /protein_id="NP_071949.1"
                     /db_xref="GeneID:58927"
                     /db_xref="RGD:62085"
                     /translation="MALRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMI
                     REVCAFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAA
                     KKD"
     exon            109..243
                     /gene="Rpl36"
                     /inference="alignment:Splign:2.1.0"
     exon            244..364
                     /gene="Rpl36"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      364
                     /gene="Rpl36"
ORIGIN      
        1 cggaaagctg cagccatggc cctgcgctac cccatggccg tgggcctcaa caaaggccac
       61 aaagtgacga aaaacgtcag caagccgaga cacagccgcc gccgcgggcg cctcaccaag
      121 cacaccaagt tcgtgcgaga tatgatccgg gaggtgtgcg cgttcgcgcc ctacgagcgg
      181 cgtgccatgg agctgctcaa ggtgtccaag gacaagcgag cactcaagtt tatcaagaag
      241 agggtgggca cgcacatccg cgccaagaga aagagggagg agctgagcaa cgtgctggca
      301 gccatgcgga aggcggcggc caagaaggat tgatgacccc tcccccaata aaagatggtt
      361 ctta
//
