LOCUS       XM_039100156             511 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosomal protein L31-like 1
            (Rpl31l1), mRNA.
ACCESSION   XM_039100156
VERSION     XM_039100156.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..511
                     /gene="Rpl31l1"
                     /note="ribosomal protein L31-like 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2 long
                     SRA reads, 15 Proteins, and 79% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:688416"
                     /db_xref="RGD:1588872"
     CDS             1..483
                     /gene="Rpl31l1"
                     /codon_start=1
                     /product="60S ribosomal protein L31-like"
                     /protein_id="XP_038956084.1"
                     /db_xref="GeneID:688416"
                     /db_xref="RGD:1588872"
                     /translation="MKDRHDLMIQKRKRTRDQLDEYGYATFHPTIPCVLLVPAKKGGE
                     KKKGRSAINEVVTREYTINIHKRIHGVGFKKGAPWALKEIRKFAMKEMGTPDVRIDTR
                     LNKAVWAKGIRNVPYHIRVRLSRNRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN
                     "
ORIGIN      
        1 atgaaggata gacatgactt aatgatccaa aaaagaaaga gaactagaga ccaattggat
       61 gaatacggct acgcaacatt ccatcccaca atcccctgtg tccttctggt tccggctaag
      121 aagggtggcg agaagaagaa gggccgttct gccatcaacg aggtggtgac ccgagaatac
      181 accatcaaca ttcacaagcg catccatgga gtgggcttca agaagggtgc tccttgggca
      241 ctcaaagaaa ttcggaaatt tgccatgaag gagatgggga ctccagatgt gcgcatagac
      301 accaggctca ataaagccgt ctgggccaaa ggaataagga atgttccata ccacatccga
      361 gtacgcttgt ccagaaatcg taatgaggat gaggattcac caaacaagct ctacacactg
      421 gtaacttacg tgcctgttac cacattcaaa aatctacaga cagtcaatgt ggatgagaac
      481 taactgctga atatcaaata aagttacaga a
//
