LOCUS       NM_022699                706 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus ribosomal protein L30 (Rpl30), mRNA.
ACCESSION   NM_022699
VERSION     NM_022699.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Behrmann,E., Loerke,J., Budkevich,T.V., Yamamoto,K., Schmidt,A.,
            Penczek,P.A., Vos,M.R., Burger,J., Mielke,T., Scheerer,P. and
            Spahn,C.M.
  TITLE     Structural snapshots of actively translating human ribosomes
  JOURNAL   Cell 161 (4), 845-857 (2015)
   PUBMED   25957688
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   3  (bases 1 to 706)
  AUTHORS   Zanivan,S., Maione,F., Hein,M.Y., Hernandez-Fernaud,J.R.,
            Ostasiewicz,P., Giraudo,E. and Mann,M.
  TITLE     SILAC-based proteomics of human primary endothelial cell
            morphogenesis unveils tumor angiogenic markers
  JOURNAL   Mol Cell Proteomics 12 (12), 3599-3611 (2013)
   PUBMED   23979707
REFERENCE   4  (bases 1 to 706)
  AUTHORS   Bifano,A.L., Atassi,T., Ferrara,T. and Driscoll,D.M.
  TITLE     Identification of nucleotides and amino acids that mediate the
            interaction between ribosomal protein L30 and the SECIS element
  JOURNAL   BMC Mol Biol 14, 12 (2013)
   PUBMED   23777426
  REMARK    GeneRIF: L30 and SBP2 bind to overlapping but non-identical sites
            on the SECIS.
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 706)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   6  (bases 1 to 706)
  AUTHORS   Simonin,D., Diaz,J.J., Kindbeiter,K., Denoroy,L. and Madjar,J.J.
  TITLE     Phosphorylation of ribosomal protein L30 after herpes simplex virus
            type 1 infection
  JOURNAL   Electrophoresis 16 (5), 854-859 (1995)
   PUBMED   7588575
REFERENCE   7  (bases 1 to 706)
  AUTHORS   Hultin,T.
  TITLE     Selective high-efficiency cross-linking of mammalian ribosomal
            proteins with cleavable thiol-directed heterobifunctional reagents:
            identification and binding directions of major protein complexes
  JOURNAL   Biochim Biophys Acta 872 (3), 226-235 (1986)
   PUBMED   3730400
REFERENCE   8  (bases 1 to 706)
  AUTHORS   Nakanishi,O., Oyanagi,M., Kuwano,Y., Tanaka,T., Nakayama,T.,
            Mitsui,H., Nabeshima,Y. and Ogata,K.
  TITLE     Molecular cloning and nucleotide sequences of cDNAs specific for
            rat liver ribosomal proteins S17 and L30
  JOURNAL   Gene 35 (3), 289-296 (1985)
   PUBMED   3840111
REFERENCE   9  (bases 1 to 706)
  AUTHORS   Faliks,D. and Meyuhas,O.
  TITLE     Coordinate regulation of ribosomal protein mRNA level in
            regenerating rat liver. Study with the corresponding mouse cloned
            cDNAs
  JOURNAL   Nucleic Acids Res 10 (3), 789-801 (1982)
   PUBMED   6121318
REFERENCE   10 (bases 1 to 706)
  AUTHORS   Uchiumi,T., Terao,K. and Ogata,K.
  TITLE     Identification of neighboring protein pairs in rat liver 60S
            ribosomal subunits cross-linked with dimethyl suberimidate or
            dimethyl 3,3'-dithiobispropionimidate
  JOURNAL   J Biochem 88 (4), 1033-1044 (1980)
   PUBMED   7451403
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Mar 18, 2021 this sequence version replaced NM_022699.3.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ223373.1, FQ133313.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840107, SAMN12840110
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-79                JAXUCZ010000007.1  67536477-67536555   c
            80-132              JAXUCZ010000007.1  67536317-67536369   c
            133-278             JAXUCZ010000007.1  67535925-67536070   c
            279-409             JAXUCZ010000007.1  67534521-67534651   c
            410-706             JAXUCZ010000007.1  67533420-67533716   c
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q22"
     gene            1..706
                     /gene="Rpl30"
                     /note="ribosomal protein L30"
                     /db_xref="GeneID:64640"
                     /db_xref="RGD:621201"
     exon            1..79
                     /gene="Rpl30"
                     /inference="alignment:Splign:2.1.0"
     exon            80..132
                     /gene="Rpl30"
                     /inference="alignment:Splign:2.1.0"
     CDS             112..459
                     /gene="Rpl30"
                     /note="60S ribosomal protein L30"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL30"
                     /protein_id="NP_073190.1"
                     /db_xref="GeneID:64640"
                     /db_xref="RGD:621201"
                     /translation="MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAK
                     LVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDS
                     DIIRSMPEQTGEK"
     exon            133..278
                     /gene="Rpl30"
                     /inference="alignment:Splign:2.1.0"
     exon            279..409
                     /gene="Rpl30"
                     /inference="alignment:Splign:2.1.0"
     exon            410..706
                     /gene="Rpl30"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctctgttcgc ctagaagagc tttgcattgt gggagctcct tcctttctcg ctccccggcc
       61 atcttggcgt ctgatcttgg ttggggcttg tcccgcacct aaggcaagag gatggtggct
      121 gcaaagaaga cgaaaaagtc tctggagtca atcaactctc ggctccaact tgttatgaaa
      181 agtggaaagt acgtgctggg gtacaaacag actctgaaga tgatcagaca aggcaaagcg
      241 aaattggtta tcctcgccaa caactgtcca gctttgagga aatctgaaat agaatactat
      301 gccatgttgg ctaaaactgg tgtccatcac tacagtggca ataacattga attgggcaca
      361 gcgtgtggaa aatactacag agtatgcaca ctggctatca ttgacccagg tgattccgat
      421 attattagaa gcatgccaga acagactggt gagaagtaaa caagaaagtt ctcctttaat
      481 aaaactttgc cagagctcct tttaaaaaat atggtgtctg ggcttcttct tgtttggctt
      541 tcttgaaacc actggcaaga cttgggtgaa agttatgtat actgcctggt ttccattttg
      601 ctggggtttt gttaaaagat tgtacactgt ttatcattat gcaaaatgtg tttctgagta
      661 tatttcggat attgaaatac acatttgtgt tgatctaata tctaat
//
