LOCUS       NM_017150                630 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus ribosomal protein L29 (Rpl29), mRNA.
ACCESSION   NM_017150
VERSION     NM_017150.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Voorhees,R.M., Fernandez,I.S., Scheres,S.H. and Hegde,R.S.
  TITLE     Structure of the mammalian ribosome-Sec61 complex to 3.4 A
            resolution
  JOURNAL   Cell 157 (7), 1632-1643 (2014)
   PUBMED   24930395
REFERENCE   3  (bases 1 to 630)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   4  (bases 1 to 630)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   5  (bases 1 to 630)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   6  (bases 1 to 630)
  AUTHORS   Chan,Y.L., Olvera,J., Paz,V. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L29
  JOURNAL   Biochem Biophys Res Commun 192 (2), 583-589 (1993)
   PUBMED   8484767
REFERENCE   7  (bases 1 to 630)
  AUTHORS   Ostvold,A.C., Hullstein,I. and Sletten,K.
  TITLE     p23, a novel mammalian nucleic acid-binding protein with homology
            to the yeast ribosomal protein YL43
  JOURNAL   FEBS Lett 298 (2-3), 219-222 (1992)
   PUBMED   1544448
REFERENCE   8  (bases 1 to 630)
  AUTHORS   Svoboda,M., Ciccarelli,E., Vandermeers-Piret,M.C., Nagy,A.M., Van
            de Weerdt,C., Bollen,A., Vandermeers,A. and Christophe,J.
  TITLE     Purification, primary structure and molecular cloning of a rat
            ribosomal protein showing homology with yeast ribosomal protein
            YL34
  JOURNAL   Eur J Biochem 203 (3), 341-346 (1992)
   PUBMED   1735422
REFERENCE   9  (bases 1 to 630)
  AUTHORS   Hultin,T.
  TITLE     Selective high-efficiency cross-linking of mammalian ribosomal
            proteins with cleavable thiol-directed heterobifunctional reagents:
            identification and binding directions of major protein complexes
  JOURNAL   Biochim Biophys Acta 872 (3), 226-235 (1986)
   PUBMED   3730400
REFERENCE   10 (bases 1 to 630)
  AUTHORS   Uchiumi,T., Terao,K. and Ogata,K.
  TITLE     Identification of neighboring protein pairs in rat liver 60S
            ribosomal subunits cross-linked with dimethyl suberimidate or
            dimethyl 3,3'-dithiobispropionimidate
  JOURNAL   J Biochem 88 (4), 1033-1044 (1980)
   PUBMED   7451403
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from X68283.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: X68283.1, FQ221016.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..630
                     /gene="Rpl29"
                     /note="ribosomal protein L29"
                     /db_xref="GeneID:29283"
                     /db_xref="RGD:62069"
     exon            1..38
                     /gene="Rpl29"
                     /inference="alignment:Splign:2.1.0"
     exon            39..83
                     /gene="Rpl29"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..517
                     /gene="Rpl29"
                     /note="60S ribosomal protein L29; P23"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL29"
                     /protein_id="NP_058846.1"
                     /db_xref="GeneID:29283"
                     /db_xref="RGD:62069"
                     /translation="MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR
                     FAKKHNKKGLKKMQANNAKAVSARAEAIKALVKPQAVKPKMPKGSSRKLSRLAFIAHP
                     KLGKKIRSYMAKGRRLCQPKPKVQTKAEAKAPAKAQAKAPAQAPKGAQAPVKAP"
     exon            84..148
                     /gene="Rpl29"
                     /inference="alignment:Splign:2.1.0"
     exon            149..630
                     /gene="Rpl29"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      630
                     /gene="Rpl29"
ORIGIN      
        1 tcttccggtc ccaggcgctc ggggagccgc ggcttaccgt gcagacatgg ccaagtccaa
       61 gaaccacacc acacacaacc agtcccgcaa atggcacaga aatggcatca agaaaccccg
      121 gtcacaaaga tacgaatctc ttaaaggggt cgaccccaag tttctgagga acatgcgctt
      181 tgccaagaag cacaacaaga aaggcctgaa gaagatgcag gccaacaatg ccaaggcagt
      241 gagtgcacga gcagaggcca tcaaggccct cgtgaagcct caggctgtca agcccaagat
      301 gccaaagggc tccagccgca aactcagccg tctggctttc atcgctcacc ccaagcttgg
      361 gaagaagatt cgaagctaca tggccaaggg tcgtaggctc tgccaaccaa agcccaaggt
      421 tcaaaccaag gcagaggcca aagctccagc taaggcccag gccaaagctc cagcccaggc
      481 tcccaagggt gcccaggccc ctgtgaaggc cccatagaac aggctcctgc cagtgtgaag
      541 acagacagac tgctgtgaca cacccaccta cacactatct gcagatgacc agtgtcctat
      601 gctgttttta caaataaact tgagacaaga
//
