LOCUS       NM_001304534             547 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus ribosomal protein L26 (Rpl26), mRNA.
ACCESSION   NM_001304534
VERSION     NM_001304534.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Henras,A.K., Plisson-Chastang,C., O'Donohue,M.F., Chakraborty,A.
            and Gleizes,P.E.
  TITLE     An overview of pre-ribosomal RNA processing in eukaryotes
  JOURNAL   Wiley Interdiscip Rev RNA 6 (2), 225-242 (2015)
   PUBMED   25346433
  REMARK    Review article
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   3  (bases 1 to 547)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   4  (bases 1 to 547)
  AUTHORS   Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J., Wauben,M.
            and Stoorvogel,W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   5  (bases 1 to 547)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   6  (bases 1 to 547)
  AUTHORS   Takagi,M., Absalon,M.J., McLure,K.G. and Kastan,M.B.
  TITLE     Regulation of p53 translation and induction after DNA damage by
            ribosomal protein L26 and nucleolin
  JOURNAL   Cell 123 (1), 49-63 (2005)
   PUBMED   16213212
  REMARK    Erratum:[Cell. 2005 Nov 4;123(3):536-7]
REFERENCE   7  (bases 1 to 547)
  AUTHORS   Odintsova,T.I., Muller,E.C., Ivanov,A.V., Egorov,T.A., Bienert,R.,
            Vladimirov,S.N., Kostka,S., Otto,A., Wittmann-Liebold,B. and
            Karpova,G.G.
  TITLE     Characterization and analysis of posttranslational modifications of
            the human large cytoplasmic ribosomal subunit proteins by mass
            spectrometry and Edman sequencing
  JOURNAL   J Protein Chem 22 (3), 249-258 (2003)
   PUBMED   12962325
REFERENCE   8  (bases 1 to 547)
  AUTHORS   Anthony,T.G., Reiter,A.K., Anthony,J.C., Kimball,S.R. and
            Jefferson,L.S.
  TITLE     Deficiency of dietary EAA preferentially inhibits mRNA translation
            of ribosomal proteins in liver of meal-fed rats
  JOURNAL   Am J Physiol Endocrinol Metab 281 (3), E430-E439 (2001)
   PUBMED   11500297
REFERENCE   9  (bases 1 to 547)
  AUTHORS   Paz,V., Olvera,J., Chan,Y.L. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L26
  JOURNAL   FEBS Lett 251 (1-2), 89-93 (1989)
   PUBMED   2546830
REFERENCE   10 (bases 1 to 547)
  AUTHORS   Marion,M.J. and Marion,C.
  TITLE     Localization of ribosomal proteins on the surface of mammalian 60S
            ribosomal subunits by means of immobilized enzymes. Correlation
            with chemical cross-linking data
  JOURNAL   Biochem Biophys Res Commun 149 (3), 1077-1083 (1987)
   PUBMED   3426607
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data because no single transcript from the reference strain was
            available for the full length of the gene. The extent of this
            transcript is supported by transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ211391.1, FQ223442.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-59                JAXUCZ010000010.1  54109692-54109750
            60-232              JAXUCZ010000010.1  54110351-54110523
            233-373             JAXUCZ010000010.1  54111572-54111712
            374-547             JAXUCZ010000010.1  54112649-54112822
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..547
                     /gene="Rpl26"
                     /note="ribosomal protein L26"
                     /db_xref="GeneID:287417"
                     /db_xref="RGD:1310607"
     exon            1..59
                     /gene="Rpl26"
                     /inference="alignment:Splign:2.1.0"
     exon            60..232
                     /gene="Rpl26"
                     /inference="alignment:Splign:2.1.0"
     CDS             65..502
                     /gene="Rpl26"
                     /note="60S ribosomal protein L26"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL24"
                     /protein_id="NP_001291463.1"
                     /db_xref="GeneID:287417"
                     /db_xref="RGD:1310607"
                     /translation="MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNV
                     RSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPS
                     KVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEKMQE"
     exon            233..373
                     /gene="Rpl26"
                     /inference="alignment:Splign:2.1.0"
     exon            374..547
                     /gene="Rpl26"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaaccggaa gtcgcatgta gatctctttc cttttgcggc catcgctgga ttgcagccgc
       61 caaaatgaag ttcaatccct tcgtgacttc tgaccgaagc aagaaccgca aacggcattt
      121 caatgcacca tctcacattc ggaggaagat catgtcttct ccgctttcca aagaactgag
      181 acagaagtat aatgttcggt ctatgcccat tcgaaaggac gacgaagttc aggttgttcg
      241 aggacactac aaaggccagc agattggcaa agtggtccaa gtgtacagga agaaatacgt
      301 catctacatt gagcgagtcc agcgagagaa ggctaacggc acaactgtcc atgtgggcat
      361 ccaccccagc aaggtggtta tcaccaggct aaagctggac aaggaccgca agaagatcct
      421 ggagaggaaa gccaagtccc ggcaagtagg aaaggagaag ggcaaataca aggaagaaac
      481 tatcgagaag atgcaggagt agaaatgtca tgcccagttt tcattaaaga ctgcttaagt
      541 agtcctg
//
